RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA596870", tax_kingdom = "Metazoa" and tax_phylum = "Hemichordata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 7 ✖

tax_kingdom 1

  • Metazoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA596870 · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12047215 12047215 PRJNA596870_P_NODE_10270_length_394_cov_4.299065_g10137_i0 PRJNA596870 10270 394 4.299065 16.9383161 Ptychodera flava 63121 Hemichordata other_Eukaryota 346 1.54e-90   NTclustered gi|2875735008|ref|XM_070698332.1| 63121 g10137 i0 85.586 76.0482233502538 333 44 84 4 1 329 686 354 PREDICTED: Ptychodera flava tubulin beta-4 chain-like (LOC139131983), mRNA blastn 29963 346 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
14597653 14597653 PRJNA596870_P_NODE_9992_length_400_cov_1.308869_g9859_i0 PRJNA596870 9992 400 1.308869 5.235476 Ptychodera flava 63121 Hemichordata other_Eukaryota 169 3.65e-37   NTclustered gi|2875658907|ref|XM_070714316.1| 63121 g9859 i0 80.734 2.265 218 40 54 2 178 394 140 356 PREDICTED: Ptychodera flava histone H2B, gonadal-like (LOC139143767), mRNA blastn 906 169 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
27900876 27900876 PRJNA596870_P_NODE_12825_length_360_cov_1.073171_g12692_i0 PRJNA596870 12825 360 1.073171 3.8634156 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 147 5.339999999999999e-42   NR XP_002730358.1 10224 g12692 i0 63.3 8.95833333333333 120 43 99.2 1 358 2 40 159 XP_002730358.1 PREDICTED: 40S ribosomal protein S7-like [Saccoglossus kowalevskii] diamond 3225 147 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
28216561 28216561 PRJNA596870_P_NODE_29146_length_251_cov_0.865169_g29013_i0 PRJNA596870 29146 251 0.865169 2.17157419 Ptychodera flava 63121 Hemichordata other_Eukaryota 65.1 5.54e-10   NR XP_070540415.1 63121 g29013 i0 40.5 0.944223107569721 79 45 94.4 1 2 238 696 772 XP_070540415.1 protein-glucosylgalactosylhydroxylysine glucosidase-like [Ptychodera flava] diamond 237 65.1 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava
29524806 29524806 PRJNA596870_P_NODE_4990_length_541_cov_1.955128_g4858_i0 PRJNA596870 4990 541 1.955128 10.57724248 Metazoa 33208 Hemichordata other_Eukaryota 213 6.349999999999999e-66   NR XP_006821611.1 10224 g4858 i0 57.2 14.9778188539741 180 75 99.8 1 540 1 29 206 XP_006821611.1 PREDICTED: 40S ribosomal protein S3a-like [Saccoglossus kowalevskii] diamond 8103 213 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
30869668 30869668 PRJNA596870_P_NODE_19874_length_300_cov_0.859031_g19741_i0 PRJNA596870 19874 300 0.859031 2.577093 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 79.3 4.1e-15   NR XP_002732370.1 10224 g19741 i0 51.3 0.8 80 37 80 1 59 298 1 78 XP_002732370.1 PREDICTED: probable very-long-chain enoyl-CoA reductase art-1-like [Saccoglossus kowalevskii] diamond 240 79.3 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
31167130 31167130 PRJNA596870_P_NODE_21975_length_287_cov_1.079439_g21842_i0 PRJNA596870 21975 287 1.079439 3.09798993 Opisthokonta 33154 Hemichordata other_Eukaryota 86.3 1.9e-17   NR XP_070542938.1 63121 g21842 i0 52.3 10.6202090592334 88 40 92 2 265 2 70 155 XP_070542938.1 alpha-methylacyl-CoA racemase-like [Ptychodera flava] diamond 3048 86.7 0.995386389850058 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Ptychoderidae Ptychodera Ptychodera flava

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;