RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA596870", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 6 ✖

tax_kingdom 1

  • Fungi · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA596870 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29605707 29605707 PRJNA596870_P_NODE_4170_length_585_cov_1.167969_g4039_i0 PRJNA596870 4170 585 1.167969 6.83261865 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 99 3.89e-21   NR PJF19047.1 1246581 g4039 i0 38.6 1.35384615384615 140 83 71.3 2 161 577 5 142 PJF19047.1 Carbohydrate esterase family 4 protein [Paramicrosporidium saccamoebae] diamond 792 99 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
29668847 29668847 PRJNA596870_P_NODE_31870_length_249_cov_0.875000_g31737_i0 PRJNA596870 31870 249 0.875 2.17875 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 42 0.0487   NR PJF17698.1 1246581 g31737 i0 59.4 0.385542168674699 32 13 38.6 0 96 1 49 80 PJF17698.1 hypothetical protein PSACC_02488 [Paramicrosporidium saccamoebae] diamond 96 42 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30016753 30016753 PRJNA596870_P_NODE_8191_length_435_cov_1.596685_g8058_i0 PRJNA596870 8191 435 1.596685 6.94557975 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 211 5.09e-60   NR PJF18791.1 1246581 g8058 i0 74.6 0.896551724137931 130 33 89.7 0 435 46 524 653 PJF18791.1 DUF1264-domain-containing protein [Paramicrosporidium saccamoebae] diamond 390 211 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30396225 30396225 PRJNA596870_P_NODE_7653_length_448_cov_1.050667_g7520_i0 PRJNA596870 7653 448 1.050667 4.70698816 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 133 3.4899999999999995e-37   NR PJF18670.1 1246581 g7520 i0 57.4 0.723214285714286 108 44 71 1 88 405 11 118 PJF18670.1 Heat shock protein Hsp20 [Paramicrosporidium saccamoebae] diamond 324 133 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
30522141 30522141 PRJNA596870_P_NODE_39253_length_242_cov_0.911243_g39120_i0 PRJNA596870 39253 242 0.911243 2.20520806 Rozella allomycis CSF55 988480 Fungi Fungi 79 1.93e-16   NR RKP20109.1 988480 g39120 i0 49.4 1.92148760330579 77 39 95.5 0 2 232 19 95 RKP20109.1 hypothetical protein ROZALSC1DRAFT_28364 [Rozella allomycis CSF55] diamond 465 79 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
30932979 30932979 PRJNA596870_P_NODE_36794_length_244_cov_0.900585_g36661_i0 PRJNA596870 36794 244 0.900585 2.1974274 Rozella allomycis CSF55 988480 Fungi Fungi 95.9 2.83e-22   NR EPZ31299.1 988480 g36661 i0 43.6 0.959016393442623 78 44 95.9 0 239 6 41 118 EPZ31299.1 Pyrimidine 5-nucleotidase domain-containing protein [Rozella allomycis CSF55] diamond 234 95.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;