RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA596870", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA596870 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18420467 18420467 PRJNA596870_P_NODE_34495_length_246_cov_0.890173_g34362_i0 PRJNA596870 34495 246 0.890173 2.18982558 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 84.7 6.4e-17   NR ETO15300.1 46433 g34362 i0 52.7 0.902439024390244 74 35 90.2 0 244 23 684 757 ETO15300.1 hypothetical protein RFI_22066 [Reticulomyxa filosa] diamond 222 84.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29700411 29700411 PRJNA596870_P_NODE_23770_length_278_cov_1.102439_g23637_i0 PRJNA596870 23770 278 1.102439 3.06478042 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 90.5 8.72e-20   NR ETO13704.1 46433 g23637 i0 50.6 8.66546762589928 87 43 93.9 0 277 17 123 209 ETO13704.1 hypothetical protein RFI_23664 [Reticulomyxa filosa] diamond 2409 90.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;