RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA594101" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA594101 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26826765 26826765 PRJNA594101_S_NODE_5761_length_678_cov_1.424793_g5473_i0 PRJNA594101 5761 678 1.424793 9.66009654 Fidelibacterota bacterium 2026760 Bacteria Bacteria 67.8 2.7e-10   NR MBI89257.1 2026760 g5473 i0 27.8 0.668141592920354 151 93 61.9 3 239 658 6 151 MBI89257.1 hypothetical protein [Fidelibacterota bacterium] diamond 453 67.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27016421 27016421 PRJNA594101_S_NODE_50882_length_248_cov_6.291429_g50580_i0 PRJNA594101 50882 248 6.291429 15.60274392 Fidelibacterota bacterium 2026760 Bacteria Bacteria 42.7 0.0335   NR MCH8272235.1 2026760 g50580 i0 37.3 0.907258064516129 75 38 90.7 2 10 234 7 72 MCH8272235.1 penicillin-binding protein 2 [Fidelibacterota bacterium] diamond 225 42.7 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27553472 27553472 PRJNA594101_S_NODE_9544_length_531_cov_2.486900_g9244_i0 PRJNA594101 9544 531 2.4869 13.205439 Fidelibacterota bacterium 2026760 Bacteria Bacteria 89.4 2.23e-17   NR MBT4382825.1 2026760 g9244 i0 34.3 1.89265536723164 166 98 93.8 3 512 15 11 165 MBT4382825.1 serine/threonine protein kinase [Fidelibacterota bacterium] diamond 1005 89.4 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28658979 28658979 PRJNA594101_S_NODE_7307_length_604_cov_2.246704_g7010_i0 PRJNA594101 7307 604 2.246704 13.57009216 Fidelibacterota bacterium 2026760 Bacteria Bacteria 47.8 0.00399   NR MDA8753885.1 2026760 g7010 i0 27.4 0.526490066225166 106 69 52.6 3 225 542 23 120 MDA8753885.1 GAF domain-containing protein [Fidelibacterota bacterium] diamond 318 47.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29840449 29840449 PRJNA594101_S_NODE_40891_length_272_cov_1.547739_g40589_i0 PRJNA594101 40891 272 1.547739 4.20985008 Bacteria 2 Bacteria Bacteria 99.8 1.94e-22   NR MBH10689.1 2026760 g40589 i0 53.3 1.98529411764706 90 41 98.2 1 3 269 182 271 MBH10689.1 alpha/beta hydrolase [Fidelibacterota bacterium] diamond 540 100 0.998 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32766302 32766302 PRJNA594101_S_NODE_2160_length_1052_cov_1.808989_g1971_i0 PRJNA594101 2160 1052 1.808989 19.03056428 Fidelibacterota bacterium 2026760 Bacteria Bacteria 118 3.52e-25   NR MAJ45158.1 2026760 g1971 i0 29.2 1.47718631178707 277 164 77.3 9 22 834 204 454 MAJ45158.1 aminopeptidase N [Fidelibacterota bacterium] diamond 1554 118 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;