RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA594101" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA594101 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23519586 23519586 PRJNA594101_S_NODE_49519_length_250_cov_1.305085_g49217_i0 PRJNA594101 49519 250 1.305085 3.2627125 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 130 4.0999999999999995e-36   NR HJW69631.1 2838779 g49217 i0 71.3 5.868 80 23 96 0 249 10 111 190 HJW69631.1 peroxiredoxin [Candidatus Binatia bacterium] diamond 1467 130 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28595803 28595803 PRJNA594101_S_NODE_16127_length_414_cov_1.709677_g15825_i0 PRJNA594101 16127 414 1.709677 7.07806278 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 63.5 1.27e-8   NR MBF6570213.1 2785449 g15825 i0 41.1 0.528985507246377 73 40 52.9 1 52 270 198 267 MBF6570213.1 alpha/beta fold hydrolase [Candidatus Binataceae bacterium] diamond 219 63.5 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28784893 28784893 PRJNA594101_S_NODE_2247_length_1035_cov_21.917879_g2055_i0 PRJNA594101 2247 1035 21.917879 226.85004765 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 51.2 0.00586   NR HEY2772621.1 2838779 g2055 i0 69.7 0.188405797101449 33 10 9.6 0 583 681 295 327 HEY2772621.1 DUF4215 domain-containing protein [Candidatus Binatia bacterium] diamond 195 51.2 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;