RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA594101", tax_kingdom = "Thermoproteati" and tax_phylum = "Nitrososphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 3 ✖

tax_kingdom 1

  • Thermoproteati · 3 ✖

bioproject 1

  • PRJNA594101 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26763241 26763241 PRJNA594101_S_NODE_38181_length_281_cov_1.399038_g37879_i0 PRJNA594101 38181 281 1.399038 3.93129678 Nitrososphaerota archaeon 2026795 Archaea Archaea 53.9 6.49e-6   NR MBI2185456.1 2026795 g37879 i0 39.4 1.31316725978648 66 40 70.5 0 278 81 75 140 MBI2185456.1 aldo/keto reductase [Nitrososphaerota archaeon] diamond 369 53.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30522063 30522063 PRJNA594101_S_NODE_28313_length_320_cov_1.680162_g28011_i0 PRJNA594101 28313 320 1.680162 5.3765184 Nitrososphaerota archaeon 2026795 Archaea Archaea 65.1 1.25e-9   NR MEM3062075.1 2026795 g28011 i0 50 1.3875 74 35 69.4 1 312 91 190 261 MEM3062075.1 ankyrin repeat domain-containing protein [Nitrososphaerota archaeon] diamond 444 65.1 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30914800 30914800 PRJNA594101_S_NODE_2354_length_1016_cov_2.485684_g2155_i0 PRJNA594101 2354 1016 2.485684 25.25454944 Candidatus Nitrosopelagicus 1593364 Archaea Archaea 84.7 2.83e-14   NR KAG2476831.1 2026768 g2155 i0 52.1 1.04232283464567 71 34 21 0 353 141 198 268 KAG2476831.1 MAG: Oxidoreductase, aldo/keto reductase family protein [Nitrosopumilales archaeon] diamond 1059 85.5 0.990643274853801 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales     Nitrosopumilales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;