RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA594101", tax_kingdom = "Nanobdellati" and tax_phylum = "Candidatus Altarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altarchaeota · 1 ✖

tax_kingdom 1

  • Nanobdellati · 1 ✖

bioproject 1

  • PRJNA594101 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28532639 28532639 PRJNA594101_S_NODE_11927_length_477_cov_1.975248_g11625_i0 PRJNA594101 11927 477 1.975248 9.42193296 Candidatus Altiarchaeota archaeon 2599821 Archaea Archaea 65.9 2.03e-9   NR MEM2918294.1 2599821 g11625 i0 39.4 1.17610062893082 94 54 59.1 2 3 284 162 252 MEM2918294.1 signal peptide peptidase SppA [Candidatus Altiarchaeota archaeon] diamond 561 65.9 1 Archaea   Nanobdellati Candidatus Altarchaeota         Candidatus Altiarchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;