RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA594101", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA594101 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8220188 8220188 PRJNA594101_S_NODE_23067_length_351_cov_1.446043_g22765_i0 PRJNA594101 23067 351 1.446043 5.07561093 Olpidium bornovanus 278681 Fungi Fungi 157 1.5799999999999994e-42   NR BAL15351.1 278681 g22765 i0 62.5 3.03418803418803 120 41 99.1 2 349 2 145 264 BAL15351.1 translation elongation factor 2, partial [Olpidium bornovanus] diamond 1065 157 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
27364548 27364548 PRJNA594101_S_NODE_26823_length_328_cov_1.298039_g26521_i0 PRJNA594101 26823 328 1.298039 4.25756792 Olpidium bornovanus 278681 Fungi Fungi 73.6 4.51e-13   NR KAG5456975.1 278681 g26521 i0 61.2 1.875 49 19 44.8 0 1 147 6 54 KAG5456975.1 MAG: WD40-repeat-containing domain protein, partial [Olpidium bornovanus] diamond 615 73.6 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;