RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA594101", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA594101 · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4394636 4394636 PRJNA594101_S_NODE_32904_length_300_cov_1.726872_g32602_i0 PRJNA594101 32904 300 1.726872 5.180616 Pithovirus LCDPAC01 2506600 Viruses Viruses 52.8 0.028   NTclustered gi|1588058088|gb|MK500295.1| 2506600 g32602 i0 100 0.186666666666667 28 0 9 0 148 175 1296 1269 MAG: Pithovirus LCDPAC01 genomic sequence blastn 56 52.8 1 Viruses Pithoviruses             Pithovirus LCDPAC01
27869283 27869283 PRJNA594101_S_NODE_3205_length_885_cov_3.176108_g2967_i0 PRJNA594101 3205 885 3.176108 28.1085558 Pithovirus LCPAC1 2506586 Viruses Viruses 155 2.34e-40   NR QBK89990.1 2506586 g2967 i0 32 1.08135593220339 319 179 95.3 8 34 876 5 323 QBK89990.1 MAG: phosphoribosyl transferase domain protein [Pithovirus LCPAC101] diamond 957 155 1 Viruses Pithoviruses             Pithovirus LCPAC101

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;