RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA594101", tax_clade = "PVC group" and tax_phylum = "Lentisphaerota"

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tax_superkingdom 1

tax_phylum 1

  • Lentisphaerota · 7 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 7 ✖

bioproject 1

  • PRJNA594101 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26890173 26890173 PRJNA594101_S_NODE_4521_length_759_cov_2.032070_g4249_i0 PRJNA594101 4521 759 2.03207 15.4234113 Victivallales bacterium 2212475 Bacteria Bacteria 83.6 3.57e-14   NR HJO91876.1 2212475 g4249 i0 48 0.387351778656126 98 41 34.8 3 414 151 467 564 HJO91876.1 hypothetical protein [Victivallales bacterium] diamond 294 83.6 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
27174377 27174377 PRJNA594101_S_NODE_48522_length_251_cov_1.747191_g48220_i0 PRJNA594101 48522 251 1.747191 4.38544941 Victivallales bacterium 2212475 Bacteria Bacteria 84.7 6.91e-17   NR HJO91876.1 2212475 g48220 i0 50.7 0.872509960159363 73 36 87.3 0 250 32 815 887 HJO91876.1 hypothetical protein [Victivallales bacterium] diamond 219 84.7 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
27995820 27995820 PRJNA594101_S_NODE_15365_length_423_cov_1.760000_g15063_i0 PRJNA594101 15365 423 1.76 7.4448 Victivallales bacterium 2212475 Bacteria Bacteria 58.9 5.87e-7   NR HJO91876.1 2212475 g15063 i0 39.3 0.595744680851064 84 42 56.7 3 241 2 661 739 HJO91876.1 hypothetical protein [Victivallales bacterium] diamond 252 58.9 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
29290237 29290237 PRJNA594101_S_NODE_50869_length_249_cov_0.863636_g50567_i0 PRJNA594101 50869 249 0.863636 2.15045364 Lentisphaeria bacterium 2053569 Bacteria Bacteria 56.2 3.11e-7   NR MBR2509768.1 2053569 g50567 i0 36.8 1.49397590361446 68 43 81.9 0 247 44 94 161 MBR2509768.1 redoxin family protein [Lentisphaeria bacterium] diamond 372 56.2 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria       Lentisphaeria bacterium
29700320 29700320 PRJNA594101_S_NODE_10330_length_510_cov_2.828375_g10029_i0 PRJNA594101 10330 510 2.828375 14.4247125 Victivallales bacterium 2212475 Bacteria Bacteria 170 1.49e-45   NR HJO91876.1 2212475 g10029 i0 58.1 0.758823529411765 129 54 75.9 0 1 387 759 887 HJO91876.1 hypothetical protein [Victivallales bacterium] diamond 387 170 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
31407116 31407116 PRJNA594101_S_NODE_44296_length_262_cov_1.952381_g43994_i0 PRJNA594101 44296 262 1.952381 5.11523822 Victivallales bacterium 2212475 Bacteria Bacteria 94 4.62e-20   NR HJO91876.1 2212475 g43994 i0 58.7 0.858778625954199 75 31 85.9 0 32 256 282 356 HJO91876.1 hypothetical protein [Victivallales bacterium] diamond 225 94 1 Bacteria PVC group Pseudomonadati Lentisphaerota Lentisphaeria Victivallales     Victivallales bacterium
31976299 31976299 PRJNA594101_S_NODE_46818_length_255_cov_2.730769_g46516_i0 PRJNA594101 46818 255 2.730769 6.96346095 Lentisphaerota bacterium 1932692 Bacteria Bacteria 50.8 7.74e-6   NR MBE6402773.1 1932692 g46516 i0 50 0.611764705882353 52 24 58.8 1 158 9 34 85 MBE6402773.1 antibiotic biosynthesis monooxygenase [Lentisphaerota bacterium] diamond 156 50.8 1 Bacteria PVC group Pseudomonadati Lentisphaerota         Lentisphaerota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;