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contig_metadata

21 rows where bioproject = "PRJNA594101", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 21 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 21 ✖

bioproject 1

  • PRJNA594101 · 21 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14595790 14595790 PRJNA594101_S_NODE_1212_length_1321_cov_3.402244_g1082_i0 PRJNA594101 1212 1321 3.402244 44.94364324 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 129 1.35e-32   NR HNA62975.1 2047756 g1082 i0 98.5 0.295230885692657 65 1 14.8 0 794 988 4 68 HNA62975.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 390 129 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
26604718 26604718 PRJNA594101_S_NODE_50381_length_249_cov_1.142045_g50079_i0 PRJNA594101 50381 249 1.142045 2.84369205 Parachlamydiales bacterium 2052178 Bacteria Bacteria 44.7 0.00787   NR MFA6915736.1 2052178 g50079 i0 46.3 0.493975903614458 41 22 49.4 0 185 63 32 72 MFA6915736.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Parachlamydiales bacterium] diamond 123 44.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
26890161 26890161 PRJNA594101_S_NODE_35221_length_291_cov_3.509174_g34919_i0 PRJNA594101 35221 291 3.509174 10.21169634 Chlamydiales bacterium 2047757 Bacteria Bacteria 78.2 1.38e-16   NR MCP5470428.1 2047757 g34919 i0 55.4 0.670103092783505 65 29 67 0 289 95 14 78 MCP5470428.1 hypothetical protein [Chlamydiales bacterium] diamond 195 78.2 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27837660 27837660 PRJNA594101_S_NODE_12804_length_461_cov_2.036082_g12502_i0 PRJNA594101 12804 461 2.036082 9.38633802 Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11 1797603 Bacteria Bacteria 63.5 1.16e-8   NR OGN62353.1 1797603 g12502 i0 40.3 0.501084598698482 77 44 50.1 1 230 460 44 118 OGN62353.1 MAG: hypothetical protein A3F09_03785 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11] diamond 231 63.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_11
27869270 27869270 PRJNA594101_S_NODE_20645_length_369_cov_1.888514_g20343_i0 PRJNA594101 20645 369 1.888514 6.96861666 Chlamydiia bacterium 2052156 Bacteria Bacteria 67.4 8.49e-11   NR MCB1136078.1 2052156 g20343 i0 47.7 0.528455284552846 65 34 52.8 0 321 127 131 195 MCB1136078.1 U-box domain-containing protein [Chlamydiia bacterium] diamond 195 67.4 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
28058825 28058825 PRJNA594101_S_NODE_21025_length_366_cov_1.668942_g20723_i0 PRJNA594101 21025 366 1.668942 6.10832772 Candidatus Neptunochlamydia sp. REUL1 3064277 Bacteria Bacteria 84 1.9e-16   NR WP_316357043.1 3064277 g20723 i0 52 0.614754098360656 75 36 61.5 0 344 120 162 236 WP_316357043.1 ubiquitin-like protein [Candidatus Neptunochlamydia sp. REUL1] diamond 225 84 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia sp. REUL1
28090363 28090363 PRJNA594101_S_NODE_2225_length_1039_cov_5.428571_g2033_i0 PRJNA594101 2225 1039 5.428571 56.40285269 Chlamydiia bacterium 2052156 Bacteria Bacteria 117 2.15e-27   NR MCB1108916.1 2052156 g2033 i0 48.3 0.346487006737247 120 58 34.6 1 362 3 27 142 MCB1108916.1 methyltransferase domain-containing protein [Chlamydiia bacterium] diamond 360 117 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
28184945 28184945 PRJNA594101_S_NODE_45066_length_260_cov_1.647059_g44764_i0 PRJNA594101 45066 260 1.647059 4.2823534 Candidatus Amphrikana amoebophyrae 3076870 Bacteria Bacteria 47 0.00135   NR MDN3504658.1 3076870 g44764 i0 41.5 0.611538461538462 53 24 54.2 2 245 105 130 181 MDN3504658.1 glycosyltransferase family A protein [Candidatus Amphrikana amoebophyrae] diamond 159 47 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Amphrikana Candidatus Amphrikana amoebophyrae
28469500 28469500 PRJNA594101_S_NODE_10806_length_499_cov_87.518779_g10505_i0 PRJNA594101 10806 499 87.518779 436.71870721 Chlamydiales bacterium 2047757 Bacteria Bacteria 257 2.44e-85   NR MCP5470421.1 2047757 g10505 i0 81.6 0.913827655310621 152 28 91.4 0 2 457 7 158 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 456 257 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
28690610 28690610 PRJNA594101_S_NODE_58587_length_232_cov_2.069182_g58285_i0 PRJNA594101 58587 232 2.069182 4.80050224 Simkania sp. 34094 Bacteria Bacteria 132 2.42e-38   NR MCB1084366.1 34094 g58285 i0 92.1 0.982758620689655 76 6 98.3 0 3 230 22 97 MCB1084366.1 hypothetical protein [Simkania sp.] diamond 228 132 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
28703903 28703903 PRJNA594101_S_NODE_37207_length_284_cov_2.023697_g36905_i0 PRJNA594101 37207 284 2.023697 5.74729948 Bacteria 2 Bacteria Bacteria 43.9 0.0211   NR WP_194847945.1 1651774 g36905 i0 45.7 1.54225352112676 46 24 47.5 1 261 127 183 228 WP_194847945.1 glycosyltransferase family A protein [Candidatus Neptunochlamydia vexilliferae] diamond 438 43.9 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Candidatus Neptunichlamydia Candidatus Neptunichlamydia vexilliferae
29037909 29037909 PRJNA594101_S_NODE_2228_length_1038_cov_102.234197_g2036_i0 PRJNA594101 2228 1038 102.234197 1061.19096486 Simkania sp. 34094 Bacteria Bacteria 257 4.7e-81   NR MCB1084310.1 34094 g2036 i0 74.7 0.491329479768786 170 43 49.1 0 275 784 1 170 MCB1084310.1 hypothetical protein [Simkania sp.] diamond 510 257 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Simkaniaceae Simkania Simkania sp.
29195647 29195647 PRJNA594101_S_NODE_11389_length_487_cov_5.289855_g11088_i0 PRJNA594101 11389 487 5.289855 25.76159385 Chlamydiales bacterium 2047757 Bacteria Bacteria 208 6.22e-66   NR MCP5470421.1 2047757 g11088 i0 83.2 0.73305954825462 119 20 73.3 0 485 129 3 121 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 357 208 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29542757 29542757 PRJNA594101_S_NODE_33150_length_299_cov_1.650442_g32848_i0 PRJNA594101 33150 299 1.650442 4.93482158 Chlamydiota bacterium 2081524 Bacteria Bacteria 63.5 3.47e-9   NR MBM3193275.1 2081524 g32848 i0 37.4 0.993311036789298 99 56 98.3 4 296 3 64 157 MBM3193275.1 glycosyltransferase family 2 protein [Chlamydiota bacterium] diamond 297 63.5 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29921974 29921974 PRJNA594101_S_NODE_7871_length_582_cov_73.811395_g7571_i0 PRJNA594101 7871 582 73.811395 429.5823189 Chlamydiales bacterium 2047757 Bacteria Bacteria 213 2.24e-67   NR MCP5470420.1 2047757 g7571 i0 79.3 0.747422680412371 145 28 74.7 1 582 148 3 145 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 435 213 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
30648210 30648210 PRJNA594101_S_NODE_24233_length_343_cov_1.803704_g23931_i0 PRJNA594101 24233 343 1.803704 6.18670472 Chlamydiota bacterium 2081524 Bacteria Bacteria 46.6 0.00476   NR MBM3208012.1 2081524 g23931 i0 41.2 0.594752186588921 68 36 59.5 3 343 140 193 256 MBM3208012.1 hypothetical protein [Chlamydiota bacterium] diamond 204 46.6 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31248798 31248798 PRJNA594101_S_NODE_51015_length_248_cov_1.697143_g50713_i0 PRJNA594101 51015 248 1.697143 4.20891464 Chlamydiota bacterium 2081524 Bacteria Bacteria 64.7 7.27e-10   NR MEC7839451.1 2081524 g50713 i0 55.6 2.6491935483871 54 24 65.3 0 13 174 750 803 MEC7839451.1 endopeptidase La [Chlamydiota bacterium] diamond 657 64.7 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31533707 31533707 PRJNA594101_S_NODE_2756_length_950_cov_4.379704_g2536_i0 PRJNA594101 2756 950 4.379704 41.607188 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 117 3.97e-29   NR HNA63020.1 2047756 g2536 i0 70.4 0.224210526315789 71 21 22.4 0 488 700 4 74 HNA63020.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 213 117 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31628371 31628371 PRJNA594101_S_NODE_52376_length_247_cov_0.885057_g52074_i0 PRJNA594101 52376 247 0.885057 2.18609079 Chlamydiota bacterium 2081524 Bacteria Bacteria 55.1 1.72e-6   NR MCX6990349.1 2081524 g52074 i0 33.8 1.88259109311741 80 52 97.2 1 245 6 464 542 MCX6990349.1 hypothetical protein [Chlamydiota bacterium] diamond 465 55.1 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
32514527 32514527 PRJNA594101_S_NODE_12979_length_458_cov_1.625974_g12677_i0 PRJNA594101 12979 458 1.625974 7.44696092 Chlamydiales bacterium 2047757 Bacteria Bacteria 84 5.37e-18   NR MCP5470423.1 2047757 g12677 i0 83 0.307860262008734 47 8 30.8 0 2 142 13 59 MCP5470423.1 DUF2039 domain-containing protein [Chlamydiales bacterium] diamond 141 84 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
32671818 32671818 PRJNA594101_S_NODE_11340_length_488_cov_7.703614_g11039_i0 PRJNA594101 11340 488 7.703614 37.59363632 Chlamydiales bacterium 2047757 Bacteria Bacteria 146 1.86e-41   NR MCP5470421.1 2047757 g11039 i0 52.3 1.84426229508197 151 66 91.6 2 484 38 11 157 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 900 146 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;