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contig_metadata

6 rows where bioproject = "PRJNA594101", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 6 ✖

bioproject 1

  • PRJNA594101 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12046052 12046052 PRJNA594101_S_NODE_15810_length_418_cov_1.405797_g15508_i0 PRJNA594101 15810 418 1.405797 5.87623146 Methanocaldococcus fervens 83171 Archaea Archaea 52.8 0.04   NTclustered gi|256793173|gb|CP001696.1| 573064 g15508 i0 96.875 0.076555023923445 32 0 7 1 75 105 951123 951092 Methanocaldococcus fervens AG86, complete genome blastn 32 52.8 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus fervens
12618502 12618502 PRJNA594101_S_NODE_33290_length_299_cov_0.938053_g32988_i0 PRJNA594101 33290 299 0.938053 2.80477847 Methanothermococcus sp. 2614238 Archaea Archaea 94 7.25e-20   NR WP_288046641.1 2614238 g32988 i0 51 4.97658862876254 98 47 98.3 1 297 4 192 288 WP_288046641.1 IGHMBP2 family helicase [Methanothermococcus sp.] diamond 1488 94 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanothermococcus Methanothermococcus sp.
27712037 27712037 PRJNA594101_S_NODE_5404_length_698_cov_4.563200_g5120_i0 PRJNA594101 5404 698 4.5632 31.851136 Methanobrevibacter thaueri 190975 Archaea Archaea 88.2 5.67e-17   NR WP_303739603.1 190975 g5120 i0 31.7 1.54727793696275 180 111 72.6 4 697 191 66 244 WP_303739603.1 MIP/aquaporin family protein [Methanobrevibacter thaueri] diamond 1080 88.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter thaueri
30079580 30079580 PRJNA594101_S_NODE_28492_length_319_cov_2.178862_g28190_i0 PRJNA594101 28492 319 2.178862 6.95056978 uncultured Methanobrevibacter sp. 253161 Archaea Archaea 43.9 0.0347   NR WP_296893570.1 253161 g28190 i0 27.2 0.865203761755486 92 66 85.6 1 5 277 308 399 WP_296893570.1 cytidylyltransferase domain-containing protein [uncultured Methanobrevibacter sp.] diamond 276 43.9 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter uncultured Methanobrevibacter sp.
30219519 30219519 PRJNA594101_S_NODE_55392_length_243_cov_1.358824_g55090_i0 PRJNA594101 55392 243 1.358824 3.30194232 Methanobacteriota 28890 Archaea Archaea 60.8 1.51e-8   NR WP_011977212.1 39152 g55090 i0 47.1 3.48148148148148 70 31 86.4 1 27 236 356 419 WP_011977212.1 IGHMBP2 family helicase [Methanococcus maripaludis] diamond 846 61.2 0.993464052287582 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanococcus Methanococcus maripaludis
30693458 30693458 PRJNA594101_S_NODE_833_length_1491_cov_5.480959_g729_i0 PRJNA594101 833 1491 5.480959 81.72109869 Methanothermococcus 155862 Archaea Archaea 98.2 1.01e-17   NR WP_048058095.1 155863 g729 i0 25.6 1.7625754527163 437 237 86.1 14 1398 115 4 361 WP_048058095.1 DEAD/DEAH box helicase [Methanothermococcus okinawensis] diamond 2628 98.2 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanothermococcus Methanothermococcus okinawensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;