RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where bioproject = "PRJNA594101", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 27 ✖

tax_clade 1

  • Metamonada · 27 ✖

bioproject 1

  • PRJNA594101 · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2414806 2414806 PRJNA594101_S_NODE_25682_length_334_cov_1.624521_g25380_i0 PRJNA594101 25682 334 1.624521 5.42590014 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 109 3.13e-27   NR XP_067773170.1 135588 g25380 i0 49.5 1.8502994011976 103 52 92.5 0 6 314 8 110 XP_067773170.1 Ras family protein [Histomonas meleagridis] diamond 618 109 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
10771536 10771536 PRJNA594101_S_NODE_5649_length_683_cov_3.291803_g5362_i0 PRJNA594101 5649 683 3.291803 22.48301449 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 56.5 0.005   NTclustered gi|2794864432|ref|XM_067915353.1| 135588 g5362 i0 94.444 0.0527086383601757 36 2 5 0 445 480 546 511 Histomonas meleagridis 26S protease regulatory subunit 6B-like (GO595_002443), partial mRNA blastn 36 56.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
26713090 26713090 PRJNA594101_S_NODE_26101_length_332_cov_1.223938_g25799_i0 PRJNA594101 26101 332 1.223938 4.06347416 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 124 3.19e-31   NR XP_067779508.1 135588 g25799 i0 51.8 7.58132530120482 110 53 99.4 0 331 2 218 327 XP_067779508.1 AGC family protein kinase [Histomonas meleagridis] diamond 2517 125 0.992 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27396032 27396032 PRJNA594101_S_NODE_33023_length_300_cov_1.048458_g32721_i0 PRJNA594101 33023 300 1.048458 3.145374 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 68.9 4.5e-11   NR XP_068349795.1 1144522 g32721 i0 63.3 0.49 49 18 49 0 270 124 244 292 XP_068349795.1 Casein kinase I isoform delta-like protein [Tritrichomonas foetus] diamond 147 68.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27553432 27553432 PRJNA594101_S_NODE_27204_length_326_cov_1.217391_g26902_i0 PRJNA594101 27204 326 1.217391 3.96869466 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 46.2 0.00592   NR XP_001321125.1 412133 g26902 i0 46.5 1.57361963190184 43 23 39.6 0 17 145 71 113 XP_001321125.1 surface antigen family [Trichomonas vaginalis G3] diamond 513 46.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28911080 28911080 PRJNA594101_S_NODE_42008_length_269_cov_1.178571_g41706_i0 PRJNA594101 42008 269 1.178571 3.17035599 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 64.7 7.43e-10   NR XP_067770480.1 135588 g41706 i0 44.2 1.94052044609665 86 45 95.9 2 8 265 48 130 XP_067770480.1 Clan SC, family S9, unassigned serine peptidase [Histomonas meleagridis] diamond 522 64.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29132528 29132528 PRJNA594101_S_NODE_11989_length_476_cov_1.533499_g11687_i0 PRJNA594101 11989 476 1.533499 7.29945524 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 60.8 1.9e-7   NR XP_001584495.1 412133 g11687 i0 34.7 0.636554621848739 101 63 63.7 2 304 2 254 351 XP_001584495.1 eIF-2b alpha beta delta subunits family [Trichomonas vaginalis G3] diamond 303 60.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29195690 29195690 PRJNA594101_S_NODE_48089_length_252_cov_2.033520_g47787_i0 PRJNA594101 48089 252 2.03352 5.1244704 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 50.4 3.92e-5   NR XP_001311653.1 412133 g47787 i0 38.9 2.58333333333333 72 32 85.7 4 220 5 26 85 XP_001311653.1 RNA polymerase II transcription regulator recruiting protein [Trichomonas vaginalis G3] diamond 651 50.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29385085 29385085 PRJNA594101_S_NODE_10689_length_502_cov_2.118881_g10388_i0 PRJNA594101 10689 502 2.118881 10.63678262 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 65.1 9.41e-9   NR XP_068352497.1 1144522 g10388 i0 53.7 1.29681274900398 54 25 32.3 0 333 172 124 177 XP_068352497.1 Ubiquitin-like modifier-activating enzyme 1 [Tritrichomonas foetus] diamond 651 65.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
29542751 29542751 PRJNA594101_S_NODE_27570_length_324_cov_1.227092_g27268_i0 PRJNA594101 27570 324 1.227092 3.97577808 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 49.7 3.27e-4   NR XP_001317531.1 412133 g27268 i0 34.8 0.611111111111111 66 43 61.1 0 84 281 333 398 XP_001317531.1 serine-type endopeptidase protein [Trichomonas vaginalis G3] diamond 198 49.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29574227 29574227 PRJNA594101_S_NODE_52150_length_247_cov_0.885057_g51848_i0 PRJNA594101 52150 247 0.885057 2.18609079 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 45.8 0.00303   NR XP_001325834.1 412133 g51848 i0 38 1.74898785425101 50 31 60.7 0 3 152 90 139 XP_001325834.1 ribonuclease inhibitor domain-containing protein [Trichomonas vaginalis G3] diamond 432 45.8 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29745473 29745473 PRJNA594101_S_NODE_46310_length_257_cov_1.255435_g46008_i0 PRJNA594101 46310 257 1.255435 3.22646795 Trichomonadida 37104 Parabasalia other_Eukaryota 54.7 2.73e-6   NR XP_001320651.1 412133 g46008 i0 47.5 1.49416342412451 61 31 70 1 1 180 620 680 XP_001320651.1 zinc ion binding [Trichomonas vaginalis G3] diamond 384 54.7 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
29998529 29998529 PRJNA594101_S_NODE_3411_length_861_cov_2.861675_g3168_i0 PRJNA594101 3411 861 2.861675 24.63902175 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 67 3.85e-9   NR BEJ44979.1 63628 g3168 i0 31.3 0.940766550522648 147 93 50.9 3 7 444 56 195 BEJ44979.1 CAMK family protein kinase, partial [Trichonympha agilis] diamond 810 67.4 0.99406528189911 Eukaryota Metamonada   Parabasalia   Trichonymphida Trichonymphidae Trichonympha Trichonympha agilis
30016708 30016708 PRJNA594101_S_NODE_7471_length_598_cov_1.558095_g7174_i0 PRJNA594101 7471 598 1.558095 9.3174081 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 186 7.109999999999998e-54   NR XP_067769474.1 135588 g7174 i0 53.2 20.7491638795987 158 74 79.3 0 596 123 93 250 XP_067769474.1 CMGC/MAPK/ERK7 protein kinase [Histomonas meleagridis] diamond 12408 186 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30743235 30743235 PRJNA594101_S_NODE_154_length_2718_cov_21.346692_g114_i0 PRJNA594101 154 2718 21.346692 580.20308856 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 57.4 1.51e-4   NR XP_001324459.1 412133 g114 i0 44.1 0.0750551876379691 68 36 7.4 2 1056 1256 186 252 XP_001324459.1 serine-type endopeptidase protein [Trichomonas vaginalis G3] diamond 204 57.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30743277 30743277 PRJNA594101_S_NODE_49594_length_250_cov_1.209040_g49292_i0 PRJNA594101 49594 250 1.20904 3.0226 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 45.4 0.0045   NR XP_001316679.1 412133 g49292 i0 44.4 0.54 45 25 54 0 240 106 64 108 XP_001316679.1 ribonuclease inhibitor domain-containing protein [Trichomonas vaginalis G3] diamond 135 45.4 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
30806485 30806485 PRJNA594101_S_NODE_26534_length_329_cov_2.968750_g26232_i0 PRJNA594101 26534 329 2.96875 9.7671875 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 91.7 4.63e-19   NR XP_067773767.1 135588 g26232 i0 41.7 0.939209726443769 103 60 93.9 0 17 325 22 124 XP_067773767.1 CAMK family protein kinase [Histomonas meleagridis] diamond 309 91.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30869595 30869595 PRJNA594101_S_NODE_22954_length_352_cov_1.068100_g22652_i0 PRJNA594101 22954 352 1.0681 3.759712 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 65.5 1.41e-9   NR XP_001321722.1 412133 g22652 i0 38.2 0.758522727272727 89 55 75.9 0 76 342 392 480 XP_001321722.1 5'->3' exoribonuclease family [Trichomonas vaginalis G3] diamond 267 65.5 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31122076 31122076 PRJNA594101_S_NODE_54635_length_244_cov_1.140351_g54333_i0 PRJNA594101 54635 244 1.140351 2.78245644 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 75.1 1.58e-13   NR XP_001314795.1 412133 g54333 i0 51.5 2.77868852459016 68 33 83.6 0 8 211 2148 2215 XP_001314795.1 dynein light chain binding [Trichomonas vaginalis G3] diamond 678 75.1 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
31293834 31293834 PRJNA594101_S_NODE_20035_length_374_cov_2.578073_g19733_i0 PRJNA594101 20035 374 2.578073 9.64199302 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 79.3 2.56e-14   NR XP_068363207.1 1144522 g19733 i0 39.8 1.58823529411765 98 57 77 1 328 41 33 130 XP_068363207.1 calcium-translocating P-type ATPase, PMCA-type family protein [Tritrichomonas foetus] diamond 594 79.3 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31754865 31754865 PRJNA594101_S_NODE_8357_length_565_cov_94.758130_g8057_i0 PRJNA594101 8357 565 94.75813 535.3834345 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 195 4.93e-60   NR XP_068360038.1 1144522 g8057 i0 57.7 1.78407079646018 168 71 89.2 0 555 52 10 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1008 195 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
31849734 31849734 PRJNA594101_S_NODE_41737_length_269_cov_4.408163_g41435_i0 PRJNA594101 41737 269 4.408163 11.85795847 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 58.9 1.05e-7   NR XP_067770547.1 135588 g41435 i0 34.5 1.94052044609665 87 53 97 1 269 9 542 624 XP_067770547.1 Coatomer subunit alpha-3 [Histomonas meleagridis] diamond 522 58.9 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
31913088 31913088 PRJNA594101_S_NODE_8457_length_562_cov_3.102249_g8157_i0 PRJNA594101 8457 562 3.102249 17.43463938 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 68.2 5.62e-10   NR XP_068364432.1 1144522 g8157 i0 51.5 0.362989323843416 68 33 36.3 0 214 11 64 131 XP_068364432.1 TATA-box-binding protein [Tritrichomonas foetus] diamond 204 68.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32134658 32134658 PRJNA594101_S_NODE_21678_length_361_cov_1.336806_g21376_i0 PRJNA594101 21678 361 1.336806 4.82586966 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 54.7 9.01e-6   NR XP_067773036.1 135588 g21376 i0 37.5 0.930747922437673 64 37 50.7 1 329 147 188 251 XP_067773036.1 Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase [Histomonas meleagridis] diamond 336 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
32134673 32134673 PRJNA594101_S_NODE_33618_length_297_cov_1.982143_g33316_i0 PRJNA594101 33618 297 1.982143 5.88696471 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 75.9 1.42e-13   NR XP_001318399.1 412133 g33316 i0 39.2 0.97979797979798 97 57 97 2 293 6 207 302 XP_001318399.1 phosphoprotein phosphatase protein [Trichomonas vaginalis G3] diamond 291 75.9 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32148055 32148055 PRJNA594101_S_NODE_40558_length_273_cov_1.675000_g40256_i0 PRJNA594101 40558 273 1.675 4.57275 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 46.2 0.00295   NR XP_001325889.1 412133 g40256 i0 71.9 5.68131868131868 32 5 35.2 1 258 163 193 220 XP_001325889.1 ribosomal large subunit biogenesis [Trichomonas vaginalis G3] diamond 1551 46.2 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
32197895 32197895 PRJNA594101_S_NODE_44578_length_261_cov_5.521277_g44276_i0 PRJNA594101 44578 261 5.521277 14.41053297 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 73.6 8.67e-14   NR XP_001323614.1 412133 g44276 i0 47.6 0.96551724137931 84 37 95.4 2 1 249 83 160 XP_001323614.1 GTPase protein [Trichomonas vaginalis G3] diamond 252 73.6 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;