RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA594101", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA594101 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26636504 26636504 PRJNA594101_S_NODE_13221_length_454_cov_2.343832_g12919_i0 PRJNA594101 13221 454 2.343832 10.64099728 Fodinibius salicampi 1920655 Bacteria Bacteria 66.2 2.01e-9   NR WP_265791284.1 1920655 g12919 i0 58.3 1.56607929515419 60 23 38.3 1 179 6 115 174 WP_265791284.1 3-deoxy-7-phosphoheptulonate synthase class II [Fodinibius salicampi] diamond 711 66.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius salicampi
31894830 31894830 PRJNA594101_S_NODE_35357_length_291_cov_1.321101_g35055_i0 PRJNA594101 35357 291 1.321101 3.84440391 Bacteria 2 Bacteria Bacteria 70.1 1.21e-11   NR WP_232803158.1 1749045 g35055 i0 45.7 7.7319587628866 81 44 83.5 0 268 26 1 81 WP_232803158.1 threonine aldolase family protein [Gracilimonas amylolytica] diamond 2250 70.5 0.994326241134752 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas amylolytica
32609001 32609001 PRJNA594101_S_NODE_48340_length_252_cov_1.234637_g48038_i0 PRJNA594101 48340 252 1.234637 3.11128524 Cyclonatronum sp. 3024185 Bacteria Bacteria 113 2.08e-28   NR WP_363320519.1 3024185 g48038 i0 65.1 3.94047619047619 83 29 98.8 0 3 251 93 175 WP_363320519.1 3-hydroxybutyryl-CoA dehydrogenase [Cyclonatronum sp.] diamond 993 113 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Cyclonatronaceae Cyclonatronum Cyclonatronum sp.
32797605 32797605 PRJNA594101_S_NODE_11020_length_495_cov_2.345972_g10719_i0 PRJNA594101 11020 495 2.345972 11.6125614 Balneola sp. 2024824 Bacteria Bacteria 46.2 0.00893   NR MBU94013.1 2024824 g10719 i0 47.7 0.266666666666667 44 23 26.7 0 149 18 32 75 MBU94013.1 hypothetical protein [Balneola sp.] diamond 132 46.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;