RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA594101", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Moraniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Moraniibacteriota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA594101 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14595783 14595783 PRJNA594101_S_NODE_11532_length_485_cov_1.308252_g11230_i0 PRJNA594101 11532 485 1.308252 6.3450222 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 56.5 0.004   NTclustered gi|2870347126|gb|CP175956.1| 2045217 g11230 i0 100 0.0618556701030928 30 0 6 0 314 343 941928 941957 MAG: Candidatus Moraniibacteriota bacterium isolate MKparc2 chromosome, complete genome blastn 30 56.5 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
26636519 26636519 PRJNA594101_S_NODE_23501_length_348_cov_1.512727_g23199_i0 PRJNA594101 23501 348 1.512727 5.26428996 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 120 3.88e-32   NR NTV55587.1 2045217 g23199 i0 46.6 5.12931034482759 116 62 100 0 348 1 12 127 NTV55587.1 dioxygenase [Candidatus Moraniibacteriota bacterium] diamond 1785 120 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
28406283 28406283 PRJNA594101_S_NODE_49926_length_250_cov_0.870056_g49624_i0 PRJNA594101 49926 250 0.870056 2.17514 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 66.6 3.38e-12   NR MBD3238767.1 2045217 g49624 i0 54.5 0.66 55 25 66 0 165 1 3 57 MBD3238767.1 RNA-binding protein [Candidatus Moraniibacteriota bacterium] diamond 165 66.6 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;