RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA591127", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA591127 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1138670 1138670 PRJNA591127_P_NODE_13521_length_200_cov_1.644172_g13352_i0 PRJNA591127 13521 200 1.644172 3.288344 Thermoproteati 1783275 Archaea Archaea 370 4.22e-98   NTclustered gi|22797874|emb|AJ496176.1| 29281 g13352 i0 100 21.63 200 0 100 0 1 200 7055 7254 Uncultured crenarchaeote 34 kb genomic fragment blastn 4326 370 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
20265160 20265160 PRJNA591127_P_NODE_11856_length_214_cov_2.497175_g11687_i0 PRJNA591127 11856 214 2.497175 5.3439545 root 1 Root_unresolved Root_unresolved 396 7.559999999999996e-106   NTclustered gi|146142099|gb|EF522603.1| 29281 g11687 i0 100 100.004672897196 214 0 100 0 1 214 146 359 Uncultured crenarchaeote clone SCGR110 16S ribosomal RNA gene, partial sequence blastn 21401 396 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
21540776 21540776 PRJNA591127_P_NODE_2817_length_423_cov_1.878238_g2650_i0 PRJNA591127 2817 423 1.878238 7.94494674 root 1 Root_unresolved Root_unresolved 782 0   NTclustered gi|82618470|gb|DQ278118.1| 29281 g2650 i0 100 103.992907801418 423 0 100 0 1 423 1243 821 Uncultured crenarchaeote clone OdenA-100ii 16S ribosomal RNA gene, partial sequence; and 16S-23S ribosomal RNA intergenic spacer, complete sequence blastn 43989 782 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;