RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591127" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11342013 11342013 PRJNA591127_P_NODE_11509_length_217_cov_2.522222_g11340_i0 PRJNA591127 11509 217 2.522222 5.47322174 Rubrivirga 1434037 Bacteria Bacteria 254 4.9e-63   NTclustered gi|2890853429|gb|CP177355.1| 3391575 g11340 i0 88.018 135 217 23 99 3 1 215 805644 805859 Rubrivirga sp. IMCC43871 chromosome, complete genome blastn 29295 254 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC43871
13319046 13319046 PRJNA591127_P_NODE_25051_length_168_cov_2.580153_g24882_i0 PRJNA591127 25051 168 2.580153 4.33465704 Roseithermus sacchariphilus 2893045 Bacteria Bacteria 261 2.15e-65   NTclustered gi|1417721500|gb|CP030158.1| 2893045 g24882 i0 94.675 271.095238095238 169 8 100 1 1 168 1400065 1399897 Roseithermus sacchariphilus strain MEBiC09517 chromosome, complete genome blastn 45544 261 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salisaetaceae Roseithermus Roseithermus sacchariphilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;