contig_metadata
14 rows where bioproject = "PRJNA591127" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 565107 | 565107 | PRJNA591127_P_NODE_2421_length_453_cov_3.896635_g2255_i0 | PRJNA591127 | 2421 | 453 | 3.896635 | 17.65175655 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 721 | 0 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g2255 | i0 | 95.364 | 228.984547461369 | 453 | 21 | 100 | 0 | 1 | 453 | 2160780 | 2160328 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 103730 | 721 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 3116037 | 3116037 | PRJNA591127_P_NODE_28163_length_153_cov_1.732759_g27994_i0 | PRJNA591127 | 28163 | 153 | 1.732759 | 2.65112127 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 278 | 1.9e-70 | NTclustered | gi|816953346|gb|CP011125.1| | 927083 | g27994 | i0 | 99.346 | 96.2941176470588 | 153 | 1 | 100 | 0 | 1 | 153 | 8616443 | 8616291 | Sandaracinus amylolyticus strain DSM 53668, complete genome | blastn | 14733 | 278 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 3116125 | 3116125 | PRJNA591127_P_NODE_9083_length_244_cov_2.449275_g8915_i0 | PRJNA591127 | 9083 | 244 | 2.449275 | 5.976231 | Archangium gephyra | 48 | Bacteria | Bacteria | 424 | 4.05e-114 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g8915 | i0 | 97.951 | 268.725409836066 | 244 | 5 | 100 | 0 | 1 | 244 | 109153 | 109396 | Archangium gephyra strain DSM 2261, complete genome | blastn | 65569 | 424 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 4392583 | 4392583 | PRJNA591127_P_NODE_26464_length_161_cov_1.258065_g26295_i0 | PRJNA591127 | 26464 | 161 | 1.258065 | 2.02548465 | Minicystis rosea | 888845 | Bacteria | Bacteria | 154 | 3.5600000000000004e-33 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g26295 | i0 | 91.892 | 27.7080745341615 | 111 | 7 | 68 | 2 | 1 | 110 | 768851 | 768960 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 4461 | 154 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 8218317 | 8218317 | PRJNA591127_P_NODE_30127_length_151_cov_3.122807_g29958_i0 | PRJNA591127 | 30127 | 151 | 3.122807 | 4.71543857 | Corallococcus exercitus | 2316736 | Bacteria | Bacteria | 257 | 2.43e-64 | NTclustered | gi|2809270164|gb|CP102577.1| | 2316736 | g29958 | i0 | 97.351 | 229.801324503311 | 151 | 4 | 100 | 0 | 1 | 151 | 87479 | 87329 | Corallococcus exercitus strain SDU142 chromosome, complete genome | blastn | 34700 | 257 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus exercitus | ||
| 11342023 | 11342023 | PRJNA591127_P_NODE_12189_length_211_cov_1.040230_g12020_i0 | PRJNA591127 | 12189 | 211 | 1.04023 | 2.1948853 | Anaeromyxobacter | 161492 | Bacteria | Bacteria | 366 | 5.83e-97 | NTclustered | gi|470482295|ref|NR_076524.1| | 404589 | g12020 | i0 | 98.104 | 72.9241706161137 | 211 | 3 | 100 | 1 | 1 | 211 | 641 | 850 | Anaeromyxobacter sp. Fw109-5 strain Fw109-5 23S ribosomal RNA, complete sequence | blastn | 15387 | 366 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter sp. Fw109-5 | ||
| 17142745 | 17142745 | PRJNA591127_P_NODE_26054_length_163_cov_1.238095_g25885_i0 | PRJNA591127 | 26054 | 163 | 1.238095 | 2.01809485 | Sandaracinus amylolyticus | 927083 | Bacteria | Bacteria | 239 | 9.72e-59 | NTclustered | gi|2183633570|gb|CP070225.1| | 927083 | g25885 | i0 | 93.21 | 3.98773006134969 | 162 | 11 | 99 | 0 | 1 | 162 | 9678019 | 9677858 | Sandaracinus strain MSr10575 (SBSa001) chromosome, complete sequence | blastn | 650 | 239 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Sandaracinaceae | Sandaracinus | Sandaracinus amylolyticus | |||
| 17716676 | 17716676 | PRJNA591127_P_NODE_24094_length_174_cov_1.846715_g23925_i0 | PRJNA591127 | 24094 | 174 | 1.846715 | 3.2132841 | Archangium | 47 | Bacteria | Bacteria | 294 | 2.1999999999999998e-75 | NTclustered | gi|545790935|gb|KF270698.1| | 83450 | g23925 | i0 | 97.126 | 117.155172413793 | 174 | 5 | 100 | 0 | 1 | 174 | 247 | 74 | Cystobacter minus strain Cbm6 23S ribosomal RNA gene, partial sequence | blastn | 20385 | 294 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium minus | ||
| 20967264 | 20967264 | PRJNA591127_P_NODE_23457_length_178_cov_2.574468_g23288_i0 | PRJNA591127 | 23457 | 178 | 2.574468 | 4.58255304 | Archangium violaceum | 83451 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|1985695619|gb|CP069396.1| | 83451 | g23288 | i0 | 100 | 0.157303370786517 | 28 | 0 | 16 | 0 | 127 | 154 | 2601184 | 2601157 | Archangium violaceum strain SDU8 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 22242288 | 22242288 | PRJNA591127_P_NODE_598_length_795_cov_3.431398_g503_i0 | PRJNA591127 | 598 | 795 | 3.431398 | 27.2796141 | Pyxidicoccus parkwayensis | 2813578 | Bacteria | Bacteria | 1271 | 0 | NTclustered | gi|1998505907|gb|CP071090.1| | 2813578 | g503 | i0 | 95.609 | 239.594968553459 | 797 | 28 | 100 | 5 | 1 | 795 | 4163402 | 4164193 | Pyxidicoccus parkwaysis strain SCPEA02 chromosome | blastn | 190478 | 1271 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus parkwayensis | ||
| 24090694 | 24090694 | PRJNA591127_P_NODE_23039_length_181_cov_1.250000_g22870_i0 | PRJNA591127 | 23039 | 181 | 1.25 | 2.2625 | Sorangium | 39643 | Bacteria | Bacteria | 211 | 2.4e-50 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g22870 | i0 | 87.778 | 102.596685082873 | 180 | 22 | 99 | 0 | 2 | 181 | 4848736 | 4848557 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 18570 | 213 | 0.990610328638498 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 25364916 | 25364916 | PRJNA591127_P_NODE_120_length_1368_cov_29.471826_g91_i0 | PRJNA591127 | 120 | 1368 | 29.471826 | 403.17457968 | Myxococcales | 29 | Bacteria | Bacteria | 673 | 0 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g91 | i0 | 82.581 | 165.320906432749 | 798 | 105 | 58 | 27 | 512 | 1298 | 1445 | 671 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 226159 | 673 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 28406190 | 28406190 | PRJNA591127_P_NODE_16506_length_197_cov_2.793750_g16337_i0 | PRJNA591127 | 16506 | 197 | 2.79375 | 5.5036875 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 42.7 | 0.02 | NR | HBO68893.1 | 2026735 | g16337 | i0 | 68 | 1.12690355329949 | 25 | 8 | 38.1 | 0 | 2 | 76 | 213 | 237 | HBO68893.1 UDP-glucuronate decarboxylase [Deltaproteobacteria bacterium] | diamond | 222 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 29903702 | 29903702 | PRJNA591127_P_NODE_15011_length_197_cov_3.606250_g14842_i0 | PRJNA591127 | 15011 | 197 | 3.60625 | 7.1043125 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 52 | 1.1e-5 | NR | MCH7914433.1 | 2026735 | g14842 | i0 | 88 | 1.90355329949239 | 25 | 3 | 38.1 | 0 | 1 | 75 | 484 | 508 | MCH7914433.1 DEAD/DEAH box helicase [Deltaproteobacteria bacterium] | diamond | 375 | 52 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;