RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA591127", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10769473 10769473 PRJNA591127_P_NODE_9989_length_233_cov_1.479592_g9821_i0 PRJNA591127 9989 233 1.479592 3.44744936 Chrocurosk virus 3129322 Viruses Viruses 302 1.88e-77   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g9821 i0 90.789 216.643776824034 228 17 97 4 7 232 1896 1671 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 50478 302 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
12044177 12044177 PRJNA591127_P_NODE_22510_length_184_cov_3.829932_g22341_i0 PRJNA591127 22510 184 3.829932 7.04707488 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 335 1.3899999999999996e-87   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g22341 i0 99.457 1 184 1 100 0 1 184 4319 4136 Malassezia restricta virus MrV40L, complete genome blastn 184 335 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;