RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA591127" and tax_phylum = "Candidatus Portnoyibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Portnoyibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA591127 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27079698 27079698 PRJNA591127_P_NODE_22922_length_181_cov_7.243056_g22753_i0 PRJNA591127 22922 181 7.243056 13.10993136 Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_ 2053593 Bacteria Bacteria 42 0.0313   NR PIQ74711.1 1974818 g22753 i0 52.9 0.56353591160221 34 16 56.4 0 80 181 77 110 PIQ74711.1 MAG: elongation factor 4 [Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_0_20_44_10] diamond 102 42 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium CG11_big_fil_rev_8_21_14_0_20_44_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;