contig_metadata
5 rows where bioproject = "PRJNA591127" and tax_phylum = "Apicomplexa"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3690188 | 3690188 | PRJNA591127_P_NODE_20723_length_196_cov_2.352201_g20554_i0 | PRJNA591127 | 20723 | 196 | 2.352201 | 4.61031396 | Babesia | 5864 | SAR_Eukaryotes | SAR_Eukaryotes | 86.1 | 1.67e-12 | NTclustered | gi|833484291|ref|XM_012911757.1| | 5866 | g20554 | i0 | 96.154 | 11.7142857142857 | 52 | 2 | 27 | 0 | 107 | 158 | 279 | 228 | Babesia bigemina 60S ribosomal L22e protein, putative partial mRNA | blastn | 2296 | 86.1 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Piroplasmida | Babesiidae | Babesia | Babesia bigemina | ||
| 5668898 | 5668898 | PRJNA591127_P_NODE_4065_length_359_cov_1.745342_g3897_i0 | PRJNA591127 | 4065 | 359 | 1.745342 | 6.26577778 | Cyclospora cayetanensis | 88456 | SAR_Eukaryotes | SAR_Eukaryotes | 108 | 7.16e-19 | NTclustered | gi|160358922|gb|EU252544.1| | 88456 | g3897 | i0 | 79.141 | 9.53203342618384 | 163 | 29 | 45 | 5 | 191 | 353 | 1674 | 1517 | Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence | blastn | 3422 | 108 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Eimeriidae | Cyclospora | Cyclospora cayetanensis | ||
| 8218295 | 8218295 | PRJNA591127_P_NODE_28327_length_152_cov_3.756522_g28158_i0 | PRJNA591127 | 28327 | 152 | 3.756522 | 5.70991344 | Plasmodium sp. gorilla clade G2 | 880535 | SAR_Eukaryotes | SAR_Eukaryotes | 56.5 | 0.001 | NTclustered | gi|1620167712|ref|XM_028681606.1| | 880535 | g28158 | i0 | 94.595 | 0.243421052631579 | 37 | 1 | 24 | 1 | 17 | 52 | 15000 | 14964 | Plasmodium sp. gorilla clade G2 E3 ubiquitin-protein ligase, putative (PADL01_0825300), partial mRNA | blastn | 37 | 56.5 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Haemosporida | Plasmodiidae | Plasmodium | Plasmodium sp. gorilla clade G2 | ||
| 24791140 | 24791140 | PRJNA591127_P_NODE_11140_length_220_cov_5.136612_g10971_i0 | PRJNA591127 | 11140 | 220 | 5.136612 | 11.3005464 | Neospora caninum | 29176 | SAR_Eukaryotes | SAR_Eukaryotes | 283 | 6.35e-72 | NTclustered | gi|820695469|tpe|LN714488.1| | 572307 | g10971 | i0 | 92.424 | 41.0136363636364 | 198 | 15 | 100 | 0 | 1 | 198 | 299715 | 299912 | TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome | blastn | 9023 | 283 | 1 | Eukaryota | Sar | Apicomplexa | Conoidasida | Eucoccidiorida | Sarcocystidae | Neospora | Neospora caninum | ||
| 28279631 | 28279631 | PRJNA591127_P_NODE_25646_length_165_cov_1.601562_g25477_i0 | PRJNA591127 | 25646 | 165 | 1.601562 | 2.6425773 | Babesia gibsoni | 33632 | SAR_Eukaryotes | SAR_Eukaryotes | 76.6 | 1.11e-15 | NR | KAK1443061.1 | 33632 | g25477 | i0 | 75.5 | 4.8 | 53 | 13 | 96.4 | 0 | 6 | 164 | 2 | 54 | KAK1443061.1 60S ribosomal protein L19 like protein [Babesia gibsoni] | diamond | 792 | 76.6 | 1 | Eukaryota | Sar | Apicomplexa | Aconoidasida | Piroplasmida | Babesiidae | Babesia | Babesia gibsoni |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;