contig_metadata
11 rows where bioproject = "PRJNA591127", tax_kingdom = "Pseudomonadati" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6943137 | 6943137 | PRJNA591127_P_NODE_11446_length_218_cov_1.314917_g11277_i0 | PRJNA591127 | 11446 | 218 | 1.314917 | 2.86651906 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 353 | 4.72e-93 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g11277 | i0 | 95.872 | 35.7018348623853 | 218 | 9 | 100 | 0 | 1 | 218 | 512486 | 512269 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 7783 | 353 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 6943216 | 6943216 | PRJNA591127_P_NODE_19626_length_197_cov_1.956250_g19457_i0 | PRJNA591127 | 19626 | 197 | 1.95625 | 3.8538125 | Bdellovibrio sp. HM001 | 3113894 | Bacteria | Bacteria | 141 | 3.5400000000000003e-29 | NTclustered | gi|2663428595|dbj|AP029174.1| | 3113894 | g19457 | i0 | 100 | 2.31472081218274 | 76 | 0 | 77 | 0 | 122 | 197 | 3211239 | 3211164 | Bdellovibrio sp. HM001 DNA, complete genome | blastn | 456 | 141 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HM001 | ||
| 14593868 | 14593868 | PRJNA591127_P_NODE_18292_length_197_cov_2.250000_g18123_i0 | PRJNA591127 | 18292 | 197 | 2.25 | 4.4325 | Pseudobdellovibrio exovorus | 453816 | Bacteria | Bacteria | 141 | 3.5400000000000003e-29 | NTclustered | gi|469929247|gb|CP003537.1| | 1184267 | g18123 | i0 | 100 | 0.771573604060914 | 76 | 0 | 77 | 0 | 1 | 76 | 108868 | 108943 | Bdellovibrio exovorus JSS, complete genome | blastn | 152 | 141 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 17142775 | 17142775 | PRJNA591127_P_NODE_30014_length_151_cov_3.228070_g29845_i0 | PRJNA591127 | 30014 | 151 | 3.22807 | 4.8743857 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 279 | 5.19e-71 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g29845 | i0 | 100 | 94.7483443708609 | 151 | 0 | 100 | 0 | 1 | 151 | 1293352 | 1293202 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 14307 | 279 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 24090709 | 24090709 | PRJNA591127_P_NODE_23919_length_175_cov_1.724638_g23750_i0 | PRJNA591127 | 23919 | 175 | 1.724638 | 3.0181165 | Peredibacter | 263370 | Bacteria | Bacteria | 235 | 1.36e-57 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g23750 | i0 | 91.279 | 102.754285714286 | 172 | 15 | 98 | 0 | 1 | 172 | 513380 | 513551 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 17982 | 235 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 27774841 | 27774841 | PRJNA591127_P_NODE_28604_length_151_cov_7.026316_g28435_i0 | PRJNA591127 | 28604 | 151 | 7.026316 | 10.60973716 | Micavibrio aeruginosavorus | 349221 | Bacteria | Bacteria | 52.8 | 5.72e-7 | NR | WP_015468462.1 | 349221 | g28435 | i0 | 96 | 0.993377483443709 | 25 | 1 | 49.7 | 0 | 2 | 76 | 15 | 39 | WP_015468462.1 head decoration protein [Micavibrio aeruginosavorus] | diamond | 150 | 52.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio aeruginosavorus | ||
| 28816334 | 28816334 | PRJNA591127_P_NODE_28828_length_151_cov_5.412281_g28659_i0 | PRJNA591127 | 28828 | 151 | 5.412281 | 8.17254431 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 70.9 | 1.23e-12 | NR | WP_374076374.1 | 959 | g28659 | i0 | 65.3 | 0.973509933774834 | 49 | 17 | 97.4 | 0 | 3 | 149 | 410 | 458 | WP_374076374.1 hypothetical protein [Bdellovibrio bacteriovorus] | diamond | 147 | 70.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 29416368 | 29416368 | PRJNA591127_P_NODE_19169_length_197_cov_2.056250_g19000_i0 | PRJNA591127 | 19169 | 197 | 2.05625 | 4.0508125 | Micavibrio sp. | 2024841 | Bacteria | Bacteria | 61.2 | 2.44e-9 | NR | HEY0900874.1 | 2024841 | g19000 | i0 | 32.7 | 2.23857868020305 | 147 | 17 | 99 | 1 | 2 | 196 | 16 | 162 | HEY0900874.1 helix-turn-helix transcriptional regulator [Micavibrio sp.] | diamond | 441 | 61.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Micavibrio | Micavibrio sp. | ||
| 31090756 | 31090756 | PRJNA591127_P_NODE_28875_length_151_cov_5.210526_g28706_i0 | PRJNA591127 | 28875 | 151 | 5.210526 | 7.86789426 | Bdellovibrio bacteriovorus | 959 | Bacteria | Bacteria | 49.3 | 4.84e-5 | NR | WP_063243448.1 | 959 | g28706 | i0 | 100 | 2.3841059602649 | 24 | 0 | 47.7 | 0 | 74 | 3 | 261 | 284 | WP_063243448.1 hypothetical protein [Bdellovibrio bacteriovorus] | diamond | 360 | 49.3 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 31262277 | 31262277 | PRJNA591127_P_NODE_19195_length_197_cov_2.050000_g19026_i0 | PRJNA591127 | 19195 | 197 | 2.05 | 4.0385 | Bdellovibrio | 958 | Bacteria | Bacteria | 52 | 1.1e-5 | NR | WP_262555486.1 | 959 | g19026 | i0 | 100 | 3.03045685279188 | 25 | 0 | 38.1 | 0 | 1 | 75 | 468 | 492 | WP_262555486.1 DNA topoisomerase VI subunit B [Bdellovibrio bacteriovorus] | diamond | 597 | 52 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 32703252 | 32703252 | PRJNA591127_P_NODE_18500_length_197_cov_2.200000_g18331_i0 | PRJNA591127 | 18500 | 197 | 2.2 | 4.334 | uncultured Bdellovibrio sp. | 239744 | Bacteria | Bacteria | 94.4 | 6.5e-21 | NR | WP_295905413.1 | 239744 | g18331 | i0 | 75.4 | 0.989847715736041 | 65 | 5 | 99 | 1 | 1 | 195 | 190 | 243 | WP_295905413.1 Fe-S cluster assembly protein SufB, partial [uncultured Bdellovibrio sp.] | diamond | 195 | 94.4 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | uncultured Bdellovibrio sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;