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contig_metadata

16 rows where bioproject = "PRJNA591127" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 16 ✖

bioproject 1

  • PRJNA591127 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
565097 565097 PRJNA591127_P_NODE_23261_length_179_cov_3.661972_g23092_i0 PRJNA591127 23261 179 3.661972 6.55492988 Ripasluj virus 3131271 Viruses Viruses 272 1.07e-68   NTclustered gi|2717322074|gb|PP173573.1| 3131271 g23092 i0 94.828 70.5307262569832 174 9 97 0 6 179 224 51 MAG: Ripasluj virus isolate MP3_k141_176986 genomic sequence blastn 12625 272 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Ripasluj virus
4966837 4966837 PRJNA591127_P_NODE_16944_length_197_cov_2.637500_g16775_i0 PRJNA591127 16944 197 2.6375 5.195875 Tobamovirus 12234 Viruses Viruses 141 3.5400000000000003e-29   NTclustered gi|323404090|gb|HQ593616.1| 12253 g16775 i0 100 62.1522842639594 76 0 76 0 1 76 151 226 Tomato mosaic virus isolate TMV-Jahrum coat protein (CP) mRNA, complete cds blastn 12244 141 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus tomatotessellati
10769381 10769381 PRJNA591127_P_NODE_28189_length_153_cov_1.344828_g28020_i0 PRJNA591127 28189 153 1.344828 2.05758684 La Jolla virus 1654357 Viruses Viruses 283 4.0799999999999995e-72   NTclustered gi|822477602|gb|KP969711.1| 1654357 g28020 i0 100 23.9542483660131 153 0 100 0 1 153 6297 6145 La Jolla virus isolate LJ19_LaJolla polyprotein gene, partial cds blastn 3665 283 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Iflaviridae   La Jolla virus
10769473 10769473 PRJNA591127_P_NODE_9989_length_233_cov_1.479592_g9821_i0 PRJNA591127 9989 233 1.479592 3.44744936 Chrocurosk virus 3129322 Viruses Viruses 302 1.88e-77   NTclustered gi|2717317280|gb|PP171770.1| 3129322 g9821 i0 90.789 216.643776824034 228 17 97 4 7 232 1896 1671 MAG: Chrocurosk virus isolate CC1A_k141_129357 genomic sequence blastn 50478 302 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Chrocurosk virus
12044177 12044177 PRJNA591127_P_NODE_22510_length_184_cov_3.829932_g22341_i0 PRJNA591127 22510 184 3.829932 7.04707488 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 335 1.3899999999999996e-87   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g22341 i0 99.457 1 184 1 100 0 1 184 4319 4136 Malassezia restricta virus MrV40L, complete genome blastn 184 335 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
13319045 13319045 PRJNA591127_P_NODE_24751_length_170_cov_1.330827_g24582_i0 PRJNA591127 24751 170 1.330827 2.2624059 Tobamovirus viridimaculae 3432895 Viruses Viruses 315 1.64e-81   NTclustered gi|1338641401|gb|KY977430.1| 12235 g24582 i0 100 100 170 0 100 0 1 170 282 113 Cucumber green mottle mosaic virus isolate CGMMV-NMG coat protein (cp) gene, complete cds blastn 17000 315 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus viridimaculae
13892973 13892973 PRJNA591127_P_NODE_8251_length_257_cov_1.259091_g8083_i0 PRJNA591127 8251 257 1.259091 3.23586387 Tobamovirus 12234 Viruses Viruses 475 1.1699999999999999e-129   NTclustered gi|1782797563|gb|MK933286.1| 12235 g8083 i0 100 100 257 0 100 0 1 257 159 415 Cucumber green mottle mosaic virus isolate GDLZ, complete genome blastn 25700 475 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus viridimaculae
18417049 18417049 PRJNA591127_P_NODE_8255_length_257_cov_0.881818_g8087_i0 PRJNA591127 8255 257 0.881818 2.26627226 Ripathuj virus 3131458 Viruses Viruses 281 2.74e-71   NTclustered gi|2717322573|gb|PP173760.1| 3131458 g8087 i0 86.853 188.782101167315 251 33 98 0 7 257 469 219 MAG: Ripathuj virus isolate RCCP2_k141_221326 genomic sequence blastn 48517 281 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripathuj virus
23517461 23517461 PRJNA591127_P_NODE_25739_length_164_cov_4.401575_g25570_i0 PRJNA591127 25739 164 4.401575 7.218583 Cucumovirus CMV 3428131 Viruses Viruses 303 3.42e-78   NTclustered gi|2296356105|gb|MW926533.1| 12305 g25570 i0 100 100.042682926829 164 0 100 0 1 164 1775 1938 Cucumber mosaic virus isolate CH99 3a protein and CP genes, complete cds blastn 16407 303 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
23517473 23517473 PRJNA591127_P_NODE_27259_length_157_cov_2.250000_g27090_i0 PRJNA591127 27259 157 2.25 3.5325 Chronazanb virus 3129852 Viruses Viruses 126 7.53e-25   NTclustered gi|2717318485|gb|PP172249.1| 3129852 g27090 i0 95 8.15286624203822 80 4 51 0 1 80 4477 4398 MAG: Chronazanb virus isolate CN1B_k141_35798 genomic sequence blastn 1280 126 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Chronazanb virus
24791159 24791159 PRJNA591127_P_NODE_13780_length_198_cov_1.503106_g13611_i0 PRJNA591127 13780 198 1.503106 2.97614988 Ripachij virus 3130407 Viruses Viruses 250 5.67e-62   NTclustered gi|2717319663|gb|PP172709.1| 3130407 g13611 i0 89.394 217.570707070707 198 21 100 0 1 198 613 416 MAG: Ripachij virus isolate KCAP1_k141_392510 genomic sequence blastn 43079 250 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripachij virus
24791261 24791261 PRJNA591127_P_NODE_24740_length_170_cov_1.458647_g24571_i0 PRJNA591127 24740 170 1.458647 2.4796999 Cucumovirus PSV 3428133 Viruses Viruses 309 7.64e-80   NTclustered gi|55140577|gb|AY775057.1| 12313 g24571 i0 99.412 63.5352941176471 170 1 100 0 1 170 1381 1550 Peanut stunt virus, complete genome blastn 10801 309 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus PSV
28595767 28595767 PRJNA591127_P_NODE_22887_length_182_cov_1.344828_g22718_i0 PRJNA591127 22887 182 1.344828 2.44758696 Leviviridae sp. 2027243 Viruses Viruses 75.9 3.43e-14   NR URG16528.1 2027243 g22718 i0 56.7 1.97802197802198 60 26 98.9 0 180 1 509 568 URG16528.1 MAG: RNA dependent RNA polymerase, partial [Leviviridae sp.] diamond 360 75.9 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
30585053 30585053 PRJNA591127_P_NODE_21433_length_192_cov_2.754839_g21264_i0 PRJNA591127 21433 192 2.754839 5.28929088 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 49.3 9.26e-5   NR UVF58767.1 2951531 g21264 i0 34.9 0.984375 63 41 98.4 0 3 191 90 152 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 189 49.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus
31944470 31944470 PRJNA591127_P_NODE_26257_length_162_cov_1.248000_g26088_i0 PRJNA591127 26257 162 1.248 2.02176 ssRNA phage Gerhypos.2_3 2786263 Viruses Viruses 70.5 1.98e-12   NR YP_010770593.1 2786264 g26088 i0 75 0.740740740740741 40 10 74.1 0 3 122 368 407 YP_010770593.1 maturation protein, partial [ssRNA phage Gerhypos.2_30] diamond 120 70.5 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Timlovirales Steitzviridae Hodnevirus Hodnevirus neosolivicinum
32166328 32166328 PRJNA591127_P_NODE_25998_length_163_cov_1.857143_g25829_i0 PRJNA591127 25998 163 1.857143 3.02714309 Plasmopara viticola lesion associated ourmia-like virus 82 2686556 Viruses Viruses 108 1.06e-25   NR YP_010800276.1 2686556 g25829 i0 90.6 0.975460122699387 53 5 97.5 0 3 161 231 283 YP_010800276.1 RNA dependent RNA polymerase, partial [Plasmopara viticola lesion associated ourmia-like virus 82] diamond 159 108 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Penoulivirus Penoulivirus alphaplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;