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contig_metadata

18 rows where bioproject = "PRJNA591127" and tax_kingdom = "Methanobacteriati"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 18 ✖

bioproject 1

  • PRJNA591127 · 18 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
565120 565120 PRJNA591127_P_NODE_26121_length_162_cov_5.112000_g25952_i0 PRJNA591127 26121 162 5.112 8.28144 Halococcus dombrowskii 179637 Archaea Archaea 294 2.03e-75   NTclustered gi|2221492933|gb|CP095007.1| 179637 g25952 i0 99.383 136.395061728395 162 1 100 0 1 162 130205 130366 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 22096 294 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
3116060 3116060 PRJNA591127_P_NODE_29943_length_151_cov_3.289474_g29774_i0 PRJNA591127 29943 151 3.289474 4.96710574 Thermococcus sp. 9oN-7 103799 Archaea Archaea 145 1.98e-30   NTclustered gi|1197451|gb|U47108.1|TSU47108 103799 g29774 i0 100 11.2781456953642 78 0 100 0 74 151 2089 2166 Thermococcus sp. DNA polymerase A (PolA) gene, complete cds blastn 1703 145 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus sp. 9oN-7
4966892 4966892 PRJNA591127_P_NODE_2244_length_466_cov_2.832168_g2082_i0 PRJNA591127 2244 466 2.832168 13.19790288 Halococcus 2249 Archaea Archaea 822 0   NTclustered gi|2221492933|gb|CP095007.1| 179637 g2082 i0 98.498 171.759656652361 466 7 100 0 1 466 130206 129741 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 80040 822 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
8218333 8218333 PRJNA591127_P_NODE_31307_length_150_cov_5.017699_g31138_i0 PRJNA591127 31307 150 5.017699 7.5265485 Methanocaldococcus jannaschii 2190 Archaea Archaea 58.4 2.63e-4   NTclustered gi|6626255|gb|L77117.1| 243232 g31138 i0 100 0.58 31 0 21 0 118 148 994216 994186 Methanocaldococcus jannaschii DSM 2661, complete genome blastn 87 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanocaldococcaceae Methanocaldococcus Methanocaldococcus jannaschii
8791754 8791754 PRJNA591127_P_NODE_807_length_706_cov_3.748879_g688_i0 PRJNA591127 807 706 3.748879 26.46708574 Halococcus 2249 Archaea Archaea 1188 0   NTclustered gi|2851472922|gb|PP407498.2| 29286 g688 i0 97.025 99.0977337110482 706 21 100 0 1 706 744 1449 Halococcus sp. strain AFM35 16S ribosomal RNA gene, partial sequence blastn 69963 1188 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.
9493486 9493486 PRJNA591127_P_NODE_25668_length_165_cov_1.328125_g25499_i0 PRJNA591127 25668 165 1.328125 2.19140625 Natronorubrum daqingense 588898 Archaea Archaea 263 5.86e-66   NTclustered gi|1134979927|gb|CP019327.1| 588898 g25499 i0 95.706 184.6 163 7 99 0 3 165 1056251 1056413 Natronorubrum daqingense strain JX313, complete sequence blastn 30459 263 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum daqingense
16441396 16441396 PRJNA591127_P_NODE_12473_length_208_cov_3.233918_g12304_i0 PRJNA591127 12473 208 3.233918 6.72654944 Halococcus 2249 Archaea Archaea 335 1.6199999999999996e-87   NTclustered gi|2221492933|gb|CP095007.1| 179637 g12304 i0 95.694 131.697115384615 209 8 100 1 1 208 129554 129346 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 27393 335 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
16441597 16441597 PRJNA591127_P_NODE_3093_length_406_cov_2.536585_g2925_i0 PRJNA591127 3093 406 2.536585 10.2985351 Halococcus 2249 Archaea Archaea 664 0   NTclustered gi|288192|emb|X72588.1| 2250 g2925 i0 96.078 149.379310344828 408 14 100 2 1 406 4073 4480 H.morrhuae ribosomal RNA operon and flanking regions blastn 60648 669 0.992526158445441 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
18990247 18990247 PRJNA591127_P_NODE_32155_length_150_cov_2.380531_g31986_i0 PRJNA591127 32155 150 2.380531 3.5707965 Halomicrobium 203135 Archaea Archaea 87.9 3.35e-13   NTclustered gi|2105355784|gb|CP084090.1| 1586233 g31986 i0 83.871 2.20666666666667 93 14 62 1 58 150 1139888 1139797 Halomicrobium urmianum strain IBRC-M: 10911 chromosome, complete genome blastn 331 87.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium urmianum
20967177 20967177 PRJNA591127_P_NODE_1517_length_551_cov_4.173152_g1367_i0 PRJNA591127 1517 551 4.173152 22.99406752 Halococcus qingdaonensis 224402 Archaea Archaea 846 0   NTclustered gi|2281256326|gb|CP101943.1| 224402 g1367 i0 94.834 150.938294010889 542 28 98 0 10 551 2645317 2645858 Halococcus qingdaonensis strain CGMCC 1.4243 chromosome, complete genome blastn 83167 846 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus qingdaonensis
21540712 21540712 PRJNA591127_P_NODE_2257_length_465_cov_3.235981_g2094_i0 PRJNA591127 2257 465 3.235981 15.04731165 Halococcus 2249 Archaea Archaea 765 0   NTclustered gi|43626|emb|X05481.1| 2250 g2094 i0 96.352 161.172043010753 466 16 100 1 1 465 2199 2664 Halococcus morrhuae 23S ribosomal RNA blastn 74945 771 0.992217898832685 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus morrhuae
22816080 22816080 PRJNA591127_P_NODE_32298_length_150_cov_1.026549_g32129_i0 PRJNA591127 32298 150 1.026549 1.5398235 Methanobrevibacter 2172 Archaea Archaea 255 8.680000000000001e-64   NTclustered gi|2791693311|gb|CP144200.1| 2173 g32129 i0 97.333 131.02 150 4 100 0 1 150 1285970 1285821 Methanobrevibacter smithii strain GRAZ-2 chromosome, complete genome blastn 19653 255 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter smithii
24791360 24791360 PRJNA591127_P_NODE_7180_length_274_cov_3.367089_g7012_i0 PRJNA591127 7180 274 3.367089 9.22582386 Halococcus dombrowskii 179637 Archaea Archaea 462 9.81e-126   NTclustered gi|2221492933|gb|CP095007.1| 179637 g7012 i0 97.08 171.478102189781 274 8 100 0 1 274 130823 131096 Halococcus dombrowskii strain H4 plasmid unnamed2, complete sequence blastn 46985 462 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus dombrowskii
26763174 26763174 PRJNA591127_P_NODE_17421_length_197_cov_2.493750_g17252_i0 PRJNA591127 17421 197 2.49375 4.9126875 Natronosalvus halobius 2953746 Archaea Archaea 75.1 7.96e-14   NR WP_253437457.1 2953746 g17252 i0 71 0.944162436548223 62 9 94.4 1 10 195 458 510 WP_253437457.1 DEAD/DEAH box helicase family protein [Natronosalvus halobius] diamond 186 75.1 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronosalvus Natronosalvus halobius
29840431 29840431 PRJNA591127_P_NODE_30391_length_151_cov_2.903509_g30222_i0 PRJNA591127 30391 151 2.903509 4.38429859 Methanomassiliicoccus 1080709 Archaea Archaea 57.8 5.27e-8   NR WP_026068762.1 1080712 g30222 i0 100 1.49006622516556 25 0 49.7 0 150 76 328 352 WP_026068762.1 coenzyme-B sulfoethylthiotransferase subunit beta [Methanomassiliicoccus luminyensis] diamond 225 57.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomassiliicoccaceae Methanomassiliicoccus Methanomassiliicoccus luminyensis
30142544 30142544 PRJNA591127_P_NODE_25772_length_164_cov_2.984252_g25603_i0 PRJNA591127 25772 164 2.984252 4.89417328 Hadesarchaea archaeon 2250276 Archaea Archaea 48.9 1.03e-5   NR MCS7131446.1 2250276 g25603 i0 46.3 0.98780487804878 54 28 98.8 1 1 162 19 71 MCS7131446.1 50S ribosomal protein L34e [Hadesarchaea archaeon] diamond 162 48.9 1 Archaea   Methanobacteriati Candidatus Hadarchaeota Candidatus Hadarchaeia       Hadesarchaea archaeon
31786295 31786295 PRJNA591127_P_NODE_20657_length_196_cov_3.069182_g20488_i0 PRJNA591127 20657 196 3.069182 6.01559672 Methanobacterium sp. 2164 Archaea Archaea 45.1 0.00266   NR MDD1775483.1 2164 g20488 i0 76 0.75 25 6 38.3 0 75 1 79 103 MDD1775483.1 CPBP family intramembrane metalloprotease [Methanobacterium sp.] diamond 147 45.1 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobacterium Methanobacterium sp.
31831376 31831376 PRJNA591127_P_NODE_14237_length_197_cov_4.643750_g14068_i0 PRJNA591127 14237 197 4.64375 9.1481875 Halalkalicoccus 332246 Archaea Archaea 58.9 3.7e-8   NR WP_066383698.1 1008153 g14068 i0 92 1.52284263959391 25 2 38.1 0 2 76 125 149 WP_066383698.1 DUF354 domain-containing protein [Halalkalicoccus paucihalophilus] diamond 300 58.9 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halalkalicoccus Halalkalicoccus paucihalophilus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;