RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591127", tax_kingdom = "Metazoa" and tax_phylum = "Ctenophora"

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tax_superkingdom 1

tax_phylum 1

  • Ctenophora · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12044222 12044222 PRJNA591127_P_NODE_27270_length_157_cov_1.950000_g27101_i0 PRJNA591127 27270 157 1.95 3.0615 Bolinopsis microptera 2820187 Ctenophora other_Eukaryota 106 9.8e-19   NTclustered gi|2700979517|ref|XM_063830744.1| 2820187 g27101 i0 81.061 1.52866242038217 132 25 84 0 3 134 294 425 PREDICTED: Bolinopsis microptera small ribosomal subunit protein uS12 (LOC134820376), mRNA blastn 240 106 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Lobata Bolinopsidae Bolinopsis Bolinopsis microptera
12617730 12617730 PRJNA591127_P_NODE_11530_length_217_cov_1.883333_g11361_i0 PRJNA591127 11530 217 1.883333 4.08683261 Cydippida 50341 Ctenophora other_Eukaryota 78.7 3.16e-10   NTclustered gi|2742502528|gb|PP905530.1| 140462 g11361 i0 92.727 22.0921658986175 55 3 25 1 164 217 5947 5893 Charistephane fugiens isolate SRR3048512 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 4794 78.7 1 Eukaryota Opisthokonta Metazoa Ctenophora Tentaculata Cydippida Mertensiidae Charistephane Charistephane fugiens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;