RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA591127", tax_kingdom = "Metazoa" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA591127 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2414209 2414209 PRJNA591127_P_NODE_25682_length_165_cov_1.210938_g25513_i0 PRJNA591127 25682 165 1.210938 1.9980477 Cnidaria 6073 Cnidaria other_Eukaryota 130 6.2e-26   NTclustered gi|66864864|gb|AY920804.1| 168787 g25513 i0 82.353 12.0484848484848 153 24 92 3 13 163 1529 1378 Scrippsia pacifica large subunit 28S ribosomal RNA gene, partial sequence blastn 1988 130 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Polyorchidae Scrippsia Scrippsia pacifica
26794907 26794907 PRJNA591127_P_NODE_22561_length_184_cov_1.591837_g22392_i0 PRJNA591127 22561 184 1.591837 2.92898008 Myxobolus squamalis 59785 Cnidaria other_Eukaryota 44.7 0.00248   NR KAF1741123.1 59785 g22392 i0 64.7 0.554347826086957 34 12 55.4 0 182 81 80 113 KAF1741123.1 hypothetical protein MXB_1517 [Myxobolus squamalis] diamond 102 44.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxobolidae Myxobolus Myxobolus squamalis
28514331 28514331 PRJNA591127_P_NODE_23607_length_177_cov_2.778571_g23438_i0 PRJNA591127 23607 177 2.778571 4.91807067 Malacalcyonacea 3028843 Cnidaria other_Eukaryota 93.2 8.62e-22   NR XP_028404257.1 151771 g23438 i0 70.7 4.91525423728814 58 17 98.3 0 175 2 32 89 XP_028404257.1 40S ribosomal protein S8-like [Dendronephthya gigantea] diamond 870 93.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Nephtheidae Dendronephthya Dendronephthya gigantea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;