RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591127", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA591127 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29795232 29795232 PRJNA591127_P_NODE_22491_length_184_cov_6.074830_g22322_i0 PRJNA591127 22491 184 6.07483 11.1776872 Paraphysoderma sedebokerense 1500003 Fungi Fungi 95.9 6.71e-24   NR KAI9142404.1 1500003 g22322 i0 72.9 1.92391304347826 59 16 96.2 0 8 184 1 59 KAI9142404.1 60s ribosomal protein l34-b, partial [Paraphysoderma sedebokerense] diamond 354 95.9 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
30977965 30977965 PRJNA591127_P_NODE_7314_length_272_cov_3.519149_g7146_i0 PRJNA591127 7314 272 3.519149 9.57208528 Eukaryota 2759 Fungi Fungi 102 8.76e-26   NR KAI9221418.1 64508 g7146 i0 59.8 8.29411764705882 82 33 90.4 0 26 271 14 95 KAI9221418.1 60S ribosomal protein L30 [Blastocladiella britannica] diamond 2256 102 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella britannica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;