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contig_metadata

18 rows where bioproject = "PRJNA591127", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 18 ✖

tax_clade 1

  • Sar · 18 ✖

bioproject 1

  • PRJNA591127 · 18 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1840593 1840593 PRJNA591127_P_NODE_21562_length_191_cov_3.337662_g21393_i0 PRJNA591127 21562 191 3.337662 6.37493442 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 348 1.87e-91   NTclustered gi|238617630|gb|FJ973394.1| 188950 g21393 i0 99.476 75.2198952879581 191 1 100 0 1 191 499 309 Bodomorpha minima strain ATCC 50339 actin (act) gene, partial cds blastn 14367 348 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
5668893 5668893 PRJNA591127_P_NODE_3625_length_378_cov_3.636364_g3457_i0 PRJNA591127 3625 378 3.636364 13.74545592 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 699 0   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g3457 i0 100 49.478835978836 378 0 100 0 1 378 2107 1730 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 18703 699 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
6943138 6943138 PRJNA591127_P_NODE_1146_length_614_cov_2.769497_g1008_i0 PRJNA591127 1146 614 2.769497 17.00471158 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 1129 0   NTclustered gi|1402550485|gb|MH488771.1| 2231170 g1008 i0 99.837 18.4674267100977 614 1 100 0 1 614 631 18 Guttulinopsis rogosa isolate ATCC 50030 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 11339 1129 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
6943237 6943237 PRJNA591127_P_NODE_21686_length_190_cov_3.830065_g21517_i0 PRJNA591127 21686 190 3.830065 7.2771235 Protaspis grandis 361427 SAR_Eukaryotes SAR_Eukaryotes 148 2.02e-31   NTclustered gi|290760486|gb|GQ144689.1| 361427 g21517 i0 81.026 13.7157894736842 195 29 99 7 1 189 2111 2303 Protaspis grandis large subunit ribosomal RNA gene, partial sequence blastn 2606 148 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Protaspis Protaspis grandis
6943358 6943358 PRJNA591127_P_NODE_9426_length_239_cov_17.524752_g9258_i0 PRJNA591127 9426 239 17.524752 41.88415728 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 440 3.9199999999999986e-119   NTclustered gi|302026154|gb|GQ377660.1| 188950 g9258 i0 100 41.7238493723849 238 0 99 0 2 239 358 121 Bodomorpha minima beta-tubulin (Btub) gene, partial cds blastn 9972 440 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9493490 9493490 PRJNA591127_P_NODE_26148_length_162_cov_3.288000_g25979_i0 PRJNA591127 26148 162 3.288 5.32656 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 289 9.44e-74   NTclustered gi|238617602|gb|FJ973377.1| 188950 g25979 i0 100 5.71604938271605 156 0 96 0 7 162 2900 2745 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 926 289 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
9493502 9493502 PRJNA591127_P_NODE_27168_length_157_cov_5.116667_g26999_i0 PRJNA591127 27168 157 5.116667 8.03316719 Guttulinopsis rogosa 2231170 SAR_Eukaryotes SAR_Eukaryotes 254 3.31e-63   NTclustered gi|1402550486|gb|MH488772.1| 2231170 g26999 i0 100 44.8407643312102 137 0 87 0 1 137 1393 1529 Guttulinopsis rogosa isolate T1 small subunit ribosomal RNA gene, partial sequence blastn 7040 254 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis rogosa
10067493 10067493 PRJNA591127_P_NODE_5808_length_304_cov_2.011236_g5640_i0 PRJNA591127 5808 304 2.011236 6.11415744 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 555 1.7699999999999994e-153   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g5640 i0 99.67 29.9539473684211 303 1 99 0 1 303 1144 842 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 9106 555 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
10769468 10769468 PRJNA591127_P_NODE_949_length_666_cov_34.359300_g821_i0 PRJNA591127 949 666 34.3593 228.832938 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 603 1.4599999999999999e-167   NTclustered gi|238617602|gb|FJ973377.1| 188950 g821 i0 99.696 97.8393393393393 329 1 98 0 2 330 30 358 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 65161 603 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
12044178 12044178 PRJNA591127_P_NODE_22550_length_184_cov_2.095238_g22381_i0 PRJNA591127 22550 184 2.095238 3.85523792 Rhogostoma leviosa 2691105 SAR_Eukaryotes SAR_Eukaryotes 324 3.01e-84   NTclustered gi|1787214106|gb|MN860277.1| 2691105 g22381 i0 98.37 99.9565217391304 184 3 100 0 1 184 230 47 Rhogostoma leviosa strain W2 small subunit ribosomal RNA gene, partial sequence blastn 18392 324 1 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Rhogostomidae Rhogostoma Rhogostoma leviosa
12617726 12617726 PRJNA591127_P_NODE_11330_length_219_cov_1.280220_g11161_i0 PRJNA591127 11330 219 1.28022 2.8036818 Rosculus 373137 SAR_Eukaryotes SAR_Eukaryotes 268 1.77e-67   NTclustered gi|1002343691|gb|KU738569.1| 1808988 g11161 i0 88.696 16.7899543378995 230 13 100 10 1 219 334 107 Rosculus elongata isolate S14D1 18S ribosomal RNA gene, partial sequence blastn 3677 268 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus elongata
13319007 13319007 PRJNA591127_P_NODE_1971_length_492_cov_37.092308_g1814_i0 PRJNA591127 1971 492 37.092308 182.49415536 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 904 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g1814 i0 99.797 24.0142276422764 492 1 100 0 1 492 316 807 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 11815 904 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
17142807 17142807 PRJNA591127_P_NODE_374_length_947_cov_115.805495_g303_i0 PRJNA591127 374 947 115.805495 1096.67803765 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 370 2.33e-97   NTclustered gi|224996436|gb|FJ654268.1| 188950 g303 i0 98.122 33.6631467793031 213 3 22 1 284 496 2 213 Bodomorpha minima 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 31879 370 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
17142823 17142823 PRJNA591127_P_NODE_5854_length_303_cov_1.909774_g5686_i0 PRJNA591127 5854 303 1.909774 5.78661522 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 324 5.42e-84   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g5686 i0 86.23 43.4950495049505 305 35 100 6 1 303 3709 4008 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 13179 324 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19691384 19691384 PRJNA591127_P_NODE_13956_length_197_cov_5.656250_g13787_i0 PRJNA591127 13956 197 5.65625 11.1428125 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 364 1.929999999999999e-96   NTclustered gi|238617602|gb|FJ973377.1| 188950 g13787 i0 100 100.319796954315 197 0 100 0 1 197 1037 841 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 19763 364 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
20967337 20967337 PRJNA591127_P_NODE_3197_length_399_cov_20.088398_g3029_i0 PRJNA591127 3197 399 20.088398 80.15270802 Bodomorpha minima 188950 SAR_Eukaryotes SAR_Eukaryotes 699 0   NTclustered gi|238617602|gb|FJ973377.1| 188950 g3029 i0 98.246 92.7919799498747 399 7 100 0 1 399 2180 1782 Bodomorpha minima strain ATCC 50339 28S ribosomal RNA gene, partial sequence blastn 37024 699 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha minima
22816108 22816108 PRJNA591127_P_NODE_538_length_830_cov_9.865069_g446_i0 PRJNA591127 538 830 9.865069 81.8800727 Cercozoa sp. DMV 1342330 SAR_Eukaryotes SAR_Eukaryotes 429 8.13e-147   NR BAN37425.1 1342330 g446 i0 72.5 4.98795180722892 276 76 99.8 0 3 830 147 422 BAN37425.1 elongation factor 1-alpha [Cercozoa sp. DMV] diamond 4140 429 1 Eukaryota Sar   Cercozoa         Cercozoa sp. DMV
30237680 30237680 PRJNA591127_P_NODE_26832_length_159_cov_1.786885_g26663_i0 PRJNA591127 26832 159 1.786885 2.84114715 Lotharella oceanica 641309 SAR_Eukaryotes SAR_Eukaryotes 62 2.87e-11   NR AIB09582.1 641309 g26663 i0 57.7 0.981132075471698 52 22 98.1 0 3 158 3 54 AIB09582.1 hypothetical protein M951_chr1100 [Lotharella oceanica] diamond 156 62 1 Eukaryota Sar   Cercozoa Chlorarachniophyceae     Lotharella Lotharella oceanica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;