RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA591127", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA591127 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26934928 26934928 PRJNA591127_P_NODE_17402_length_197_cov_2.500000_g17233_i0 PRJNA591127 17402 197 2.5 4.925 Bacteria 2 Bacteria Bacteria 46.6 1.99e-4   NR MBP7845841.1 2053589 g17233 i0 75 1.11167512690355 24 6 36.5 0 76 5 37 60 MBP7845841.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 219 46.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27048128 27048128 PRJNA591127_P_NODE_27882_length_154_cov_3.376068_g27713_i0 PRJNA591127 27882 154 3.376068 5.19914472 Minisyncoccota bacterium 2053589 Bacteria Bacteria 96.3 1.1399999999999999e-23   NR MDR3570669.1 2053589 g27713 i0 90.2 0.993506493506494 51 5 99.4 0 154 2 57 107 MDR3570669.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 153 96.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28500952 28500952 PRJNA591127_P_NODE_28607_length_151_cov_6.982456_g28438_i0 PRJNA591127 28607 151 6.982456 10.54350856 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.7 4.53e-6   NR MDD3662973.1 2053589 g28438 i0 85.2 1.09271523178808 27 4 53.6 0 148 68 49 75 MDD3662973.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 165 49.7 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32860759 32860759 PRJNA591127_P_NODE_24000_length_174_cov_6.883212_g23831_i0 PRJNA591127 24000 174 6.883212 11.97678888 Minisyncoccota bacterium 2053589 Bacteria Bacteria 41.6 0.0134   NR MDR3570671.1 2053589 g23831 i0 48.4 1.10344827586207 64 26 98.3 2 172 2 35 98 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 192 41.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;