contig_metadata
13 rows where bioproject = "PRJNA591000" and tax_phylum = "Verrucomicrobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22242052 | 22242052 | PRJNA591000_P_NODE_3758_length_738_cov_5.322990_g2936_i0 | PRJNA591000 | 3758 | 738 | 5.32299 | 39.2836662 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 240 | 1.06e-68 | NR | MBX7207638.1 | 2026800 | g2936 | i0 | 63.8 | 0.886178861788618 | 218 | 22 | 88.6 | 4 | 725 | 72 | 1102 | 1262 | MBX7207638.1 DUF4011 domain-containing protein [Verrucomicrobiaceae bacterium] | diamond | 654 | 240 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 27680249 | 27680249 | PRJNA591000_P_NODE_12324_length_414_cov_0.805195_g10738_i0 | PRJNA591000 | 12324 | 414 | 0.805195 | 3.3335073 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 48.9 | 0.00143 | NR | MEK0448308.1 | 2026799 | g10738 | i0 | 64.7 | 0.246376811594203 | 34 | 12 | 24.6 | 0 | 395 | 294 | 335 | 368 | MEK0448308.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 102 | 48.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 27680251 | 27680251 | PRJNA591000_P_NODE_7784_length_499_cov_2.546809_g6294_i0 | PRJNA591000 | 7784 | 499 | 2.546809 | 12.70857691 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 92 | 8.56e-21 | NR | HEY4417590.1 | 2499141 | g6294 | i0 | 46.1 | 0.535070140280561 | 89 | 47 | 52.9 | 1 | 461 | 198 | 1 | 89 | HEY4417590.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 267 | 92 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 27711947 | 27711947 | PRJNA591000_P_NODE_13924_length_395_cov_4.062842_g12329_i0 | PRJNA591000 | 13924 | 395 | 4.062842 | 16.0482259 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 91.7 | 3.9900000000000005e-21 | NR | HEY4417590.1 | 2499141 | g12329 | i0 | 46.1 | 0.675949367088608 | 89 | 47 | 66.8 | 1 | 357 | 94 | 1 | 89 | HEY4417590.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 267 | 91.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 29605598 | 29605598 | PRJNA591000_P_NODE_370_length_1474_cov_20.310727_g258_i0 | PRJNA591000 | 370 | 1474 | 20.310727 | 299.38011598 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 143 | 1.13e-33 | NR | MEI6676827.1 | 2026799 | g258 | i0 | 51.4 | 0.293080054274084 | 144 | 69 | 29.1 | 1 | 767 | 339 | 41 | 184 | MEI6676827.1 ParB/RepB/Spo0J family partition protein [Verrucomicrobiota bacterium] | diamond | 432 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29605599 | 29605599 | PRJNA591000_P_NODE_7110_length_525_cov_95.171371_g5688_i0 | PRJNA591000 | 7110 | 525 | 95.171371 | 499.64969775 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 184 | 2.6699999999999992e-55 | NR | MBK8037706.1 | 2026800 | g5688 | i0 | 73.9 | 0.68 | 119 | 31 | 68 | 0 | 1 | 357 | 100 | 218 | MBK8037706.1 hypothetical protein [Verrucomicrobiaceae bacterium] | diamond | 357 | 184 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 30016611 | 30016611 | PRJNA591000_P_NODE_14091_length_393_cov_2.939560_g12495_i0 | PRJNA591000 | 14091 | 393 | 2.93956 | 11.5524708 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 105 | 5.229999999999999e-24 | NR | WP_395739316.1 | 1965333 | g12495 | i0 | 47.9 | 1.06870229007634 | 140 | 28 | 99.2 | 5 | 3 | 392 | 109 | 213 | WP_395739316.1 CHC2 zinc finger domain-containing protein [Prosthecobacter sp.] | diamond | 420 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. | |
| 30205799 | 30205799 | PRJNA591000_P_NODE_5532_length_620_cov_4.978003_g4362_i0 | PRJNA591000 | 5532 | 620 | 4.978003 | 30.8636186 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 263 | 7.27e-86 | NR | MEY4244055.1 | 2026799 | g4362 | i0 | 62.5 | 0.890322580645161 | 184 | 69 | 89 | 0 | 613 | 62 | 16 | 199 | MEY4244055.1 adenine-specific DNA-methyltransferase [Verrucomicrobiota bacterium] | diamond | 552 | 263 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 30364472 | 30364472 | PRJNA591000_P_NODE_8192_length_486_cov_1.599562_g6680_i0 | PRJNA591000 | 8192 | 486 | 1.599562 | 7.77387132 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 56.6 | 1.79e-6 | NR | HOC56633.1 | 2026799 | g6680 | i0 | 47.3 | 0.339506172839506 | 55 | 29 | 34 | 0 | 481 | 317 | 44 | 98 | HOC56633.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 165 | 56.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32102811 | 32102811 | PRJNA591000_P_NODE_8618_length_474_cov_1.622472_g7090_i0 | PRJNA591000 | 8618 | 474 | 1.622472 | 7.69051728 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 75.5 | 1.59e-12 | NR | MBS0604045.1 | 2026799 | g7090 | i0 | 53.6 | 0.436708860759494 | 69 | 29 | 41.8 | 1 | 203 | 6 | 489 | 557 | MBS0604045.1 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase [Verrucomicrobiota bacterium] | diamond | 207 | 75.5 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32356246 | 32356246 | PRJNA591000_P_NODE_15839_length_202_cov_3.260116_g14233_i0 | PRJNA591000 | 15839 | 202 | 3.260116 | 6.58543432 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 92.8 | 3.3e-22 | NR | MEI6872177.1 | 2026799 | g14233 | i0 | 64.1 | 0.95049504950495 | 64 | 23 | 95 | 0 | 11 | 202 | 61 | 124 | MEI6872177.1 hypothetical protein [Verrucomicrobiota bacterium] | diamond | 192 | 92.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 32514469 | 32514469 | PRJNA591000_P_NODE_15459_length_318_cov_10.792388_g13853_i0 | PRJNA591000 | 15459 | 318 | 10.792388 | 34.31979384 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 130 | 4.96e-35 | NR | MDH4474878.1 | 2026800 | g13853 | i0 | 77.5 | 0.754716981132076 | 80 | 16 | 73.6 | 1 | 72 | 305 | 1 | 80 | MDH4474878.1 hypothetical protein [Verrucomicrobiaceae bacterium] | diamond | 240 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 32735013 | 32735013 | PRJNA591000_P_NODE_14740_length_385_cov_0.941011_g13138_i0 | PRJNA591000 | 14740 | 385 | 0.941011 | 3.62289235 | Prosthecobacter sp. | 1965333 | Bacteria | Bacteria | 58.9 | 3.77e-7 | NR | WP_395739310.1 | 1965333 | g13138 | i0 | 74.3 | 0.272727272727273 | 35 | 9 | 27.3 | 0 | 383 | 279 | 15 | 49 | WP_395739310.1 terminase gpA endonuclease subunit [Prosthecobacter sp.] | diamond | 105 | 58.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter sp. |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;