RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA591000" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA591000 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28216430 28216430 PRJNA591000_P_NODE_2886_length_807_cov_14.304627_g2191_i0 PRJNA591000 2886 807 14.304627 115.43833989 Chlamydiota bacterium 2081524 Bacteria Bacteria 121 7.01e-29   NR MBM3201302.1 2081524 g2191 i0 63.4 0.345724907063197 93 34 34.6 0 18 296 146 238 MBM3201302.1 hypothetical protein [Chlamydiota bacterium] diamond 279 121 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
29808725 29808725 PRJNA591000_P_NODE_7191_length_522_cov_3.918864_g5752_i0 PRJNA591000 7191 522 3.918864 20.45647008 Pseudomonadati 3379134 Bacteria Bacteria 88.2 1.22e-18   NR MDP3980664.1 2081524 g5752 i0 42.6 1.61494252873563 94 51 54 1 294 13 2 92 MDP3980664.1 class I SAM-dependent methyltransferase [Chlamydiota bacterium] diamond 843 88.6 0.99548532731377 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium
31280334 31280334 PRJNA591000_P_NODE_9035_length_464_cov_1.255172_g7493_i0 PRJNA591000 9035 464 1.255172 5.82399808 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 49.3 7.81e-4   NR HEY2811764.1 2047756 g7493 i0 51.1 0.290948275862069 45 22 29.1 0 10 144 80 124 HEY2811764.1 endonuclease VII domain-containing protein [Rhabdochlamydiaceae bacterium] diamond 135 49.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31357230 31357230 PRJNA591000_P_NODE_7196_length_522_cov_3.292089_g5757_i0 PRJNA591000 7196 522 3.292089 17.18470458 Pseudomonadati 3379134 Bacteria Bacteria 88.2 1.22e-18   NR MDP3980664.1 2081524 g5757 i0 42.6 1.61494252873563 94 51 54 1 294 13 2 92 MDP3980664.1 class I SAM-dependent methyltransferase [Chlamydiota bacterium] diamond 843 88.6 0.99548532731377 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;