RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591000" and tax_phylum = "Candidatus Amesiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Amesiibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28766852 28766852 PRJNA591000_P_NODE_11067_length_429_cov_1.390000_g9490_i0 PRJNA591000 11067 429 1.39 5.9631 Bacteria 2 Bacteria Bacteria 57.4 6.03e-7   NR KKU56643.1 1618357 g9490 i0 71.4 1.22377622377622 35 10 24.5 0 3 107 94 128 KKU56643.1 MAG: ATP:cob(I)alamin adenosyltransferase [Candidatus Amesbacteria bacterium GW2011_GWA2_47_11] diamond 525 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium GW2011_GWA2_47_11
32007958 32007958 PRJNA591000_P_NODE_9218_length_460_cov_1.837587_g7671_i0 PRJNA591000 9218 460 1.837587 8.4529002 Candidatus Amesbacteria bacterium GW2 1932011 Bacteria Bacteria 140 4.66e-39   NR KKS32406.1 1618356 g7671 i0 80 0.58695652173913 90 15 58.7 1 275 6 30 116 KKS32406.1 MAG: hypothetical protein UU93_C0007G0011 [Candidatus Amesbacteria bacterium GW2011_GWA2_42_12] diamond 270 140 1 Bacteria Bacteria candidate phyla   Candidatus Amesiibacteriota         Candidatus Amesbacteria bacterium GW2011_GWA2_42_12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;