RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA591000" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA591000 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27711949 27711949 PRJNA591000_P_NODE_7964_length_493_cov_5.577586_g6459_i0 PRJNA591000 7964 493 5.577586 27.49749898 Halopenitus persicus 1048396 Archaea Archaea 46.2 0.0212   NR WP_096390784.1 1048396 g6459 i0 33.9 0.663286004056795 109 66 65.7 3 117 440 21 124 WP_096390784.1 sugar kinase [Halopenitus persicus] diamond 327 46.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halopenitus Halopenitus persicus
29668707 29668707 PRJNA591000_P_NODE_6070_length_581_cov_3.628623_g4793_i0 PRJNA591000 6070 581 3.628623 21.08229963 Methanosarcina sp. 2213 Archaea Archaea 213 9.72e-67   NR HET8685478.1 2213 g4793 i0 68.8 0.743545611015491 144 39 71.3 1 579 166 60 203 HET8685478.1 hypothetical protein [Methanosarcina sp.] diamond 432 213 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina sp.
30047894 30047894 PRJNA591000_P_NODE_4171_length_712_cov_3.587116_g3291_i0 PRJNA591000 4171 712 3.587116 25.54026592 Methanofastidiosum sp. 2666341 Archaea Archaea 81.6 1.71e-14   NR HQF90298.1 2666341 g3291 i0 42.7 0.463483146067416 110 51 46.3 2 342 13 2 99 HQF90298.1 hypothetical protein [Methanofastidiosum sp.] diamond 330 81.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Candidatus Methanofastidiosia Candidatus Methanofastidiosales Candidatus Methanofastidiosaceae Candidatus Methanofastidiosum Methanofastidiosum sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;