RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591000", tax_clade = "Opisthokonta" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28847988 28847988 PRJNA591000_P_NODE_5688_length_608_cov_3.174439_g4479_i0 PRJNA591000 5688 608 3.174439 19.30058912 Brachionus calyciflorus 104777 Rotifera other_Eukaryota 138 7.3699999999999995e-34   NR CAF0863024.1 104777 g4479 i0 58.8 0.730263157894737 148 53 71.5 4 487 53 421 563 CAF0863024.1 unnamed protein product [Brachionus calyciflorus] diamond 444 138 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus calyciflorus
32514472 32514472 PRJNA591000_P_NODE_8299_length_482_cov_10.165563_g6783_i0 PRJNA591000 8299 482 10.165563 48.99801366 Adineta steineri 433720 Rotifera other_Eukaryota 64.3 1.26e-8   NR CAF1511323.1 433720 g6783 i0 64.7 0.317427385892116 51 17 31.7 1 324 476 138 187 CAF1511323.1 unnamed protein product [Adineta steineri] diamond 153 64.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta steineri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;