RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA591000", tax_clade = "Opisthokonta" and tax_phylum = "Ascomycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 5 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 5 ✖

bioproject 1

  • PRJNA591000 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7516473 7516473 PRJNA591000_P_NODE_13046_length_406_cov_0.899204_g11457_i0 PRJNA591000 13046 406 0.899204 3.65076824 Eurotiomycetes 147545 Fungi Fungi 182 4.76e-41   NTclustered gi|225134683|gb|FJ345355.1| 5076 g11457 i0 98.077 28.1896551724138 104 2 26 0 293 396 3609 3712 Penicillium chrysogenum strain ATCC 10108 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 11445 183 0.994535519125683 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium chrysogenum
15166719 15166719 PRJNA591000_P_NODE_2012_length_908_cov_2.277588_g1485_i0 PRJNA591000 2012 908 2.277588 20.68049904 Pleosporaceae 28556 Fungi Fungi 261 1.4e-64   NTclustered gi|745167088|gb|KP143686.1| 91367 g1485 i0 98.649 39.8810572687225 148 0 47 2 400 546 695 549 Curvularia coicis strain C4015B1PD1CC1123 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 36212 261 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Curvularia Curvularia coicis
25364891 25364891 PRJNA591000_P_NODE_13860_length_396_cov_2.378747_g12265_i0 PRJNA591000 13860 396 2.378747 9.41983812 root 1 Root_unresolved Root_unresolved 54.7 0.011   NTclustered gi|1919354724|ref|XM_036634783.1| 690259 g12265 i0 100 0.578282828282828 29 0 7 0 27 55 436 408 Colletotrichum siamense Sporulation protein kinase pit1 (pit1), partial mRNA blastn 229 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum siamense
28847989 28847989 PRJNA591000_P_NODE_6888_length_535_cov_2.345850_g5489_i0 PRJNA591000 6888 535 2.34585 12.5502975 Knufia fluminis 191047 Fungi Fungi 66.6 3.65e-9   NR KAK5952017.1 191047 g5489 i0 31.9 0.807476635514019 144 85 80.7 1 61 492 304 434 KAK5952017.1 hypothetical protein OHC33_006903 [Knufia fluminis] diamond 432 66.6 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Knufia Knufia fluminis
31388896 31388896 PRJNA591000_P_NODE_10256_length_441_cov_1.300971_g8689_i0 PRJNA591000 10256 441 1.300971 5.73728211 Trichomeriaceae 1233474 Fungi Fungi 61.2 1.11e-7   NR XP_064728618.1 1635080 g8689 i0 86.2 0.591836734693878 29 4 19.7 0 88 2 813 841 XP_064728618.1 uncharacterized protein PMZ80_006944 [Knufia obscura] diamond 261 61.2 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Trichomeriaceae Knufia Knufia obscura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;