RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA591000", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA591000 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26604635 26604635 PRJNA591000_P_NODE_12781_length_409_cov_1.110526_g11193_i0 PRJNA591000 12781 409 1.110526 4.54205134 Ignavibacteria bacterium 2053306 Bacteria Bacteria 78.6 1.96e-14   NR MBK7034678.1 2053306 g11193 i0 100 0.264058679706601 36 0 26.4 0 110 3 117 152 MBK7034678.1 hypothetical protein [Ignavibacteria bacterium] diamond 108 78.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
26998072 26998072 PRJNA591000_P_NODE_8942_length_466_cov_1.629291_g7403_i0 PRJNA591000 8942 466 1.629291 7.59249606 Bacteria 2 Bacteria Bacteria 67 5.2e-11   NR RPI00246.1 2026749 g7403 i0 63.3 0.630901287553648 49 8 25.1 1 32 148 1 49 RPI00246.1 MAG: hypothetical protein EHM64_17325, partial [Ignavibacteriota bacterium] diamond 294 67 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
29587529 29587529 PRJNA591000_P_NODE_10030_length_444_cov_6.402410_g8467_i0 PRJNA591000 10030 444 6.40241 28.4267004 FCB group 1783270 Bacteria Bacteria 47.8 7.19e-4   NR RPI19060.1 2026749 g8467 i0 33.3 2.66891891891892 75 47 49.3 2 95 313 15 88 RPI19060.1 MAG: XRE family transcriptional regulator [Ignavibacteriota bacterium] diamond 1185 48.1 0.993762993762994 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;