RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA591000" and tax_clade = "CRESS viruses"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • CRESS viruses · 2 ✖

bioproject 1

  • PRJNA591000 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4966744 4966744 PRJNA591000_P_NODE_13664_length_398_cov_42.501355_g12072_i0 PRJNA591000 13664 398 42.501355 169.1553929 Viruses 10239 Viruses Viruses 453 8.940000000000001e-123   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g12072 i0 100 3.13316582914573 245 0 100 0 154 398 1296 1052 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 1247 453 1 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus
4966748 4966748 PRJNA591000_P_NODE_544_length_1340_cov_22.805492_g368_i0 PRJNA591000 544 1340 22.805492 305.5935928 Viruses 10239 Viruses Viruses 2001 0   NTclustered gi|1848664582|gb|MN891788.1| 2740165 g368 i0 99.725 2.96567164179104 1092 3 93 0 1 1092 1307 2398 Brassica caulorapa CRESS virus strain pt079-cirl-1, complete genome blastn 3974 2006 0.997507477567298 Viruses CRESS viruses Shotokuvirae Cressdnaviricota         Brassica caulorapa CRESS virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;