RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA588137", tax_clade = "Opisthokonta" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA588137 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18416613 18416613 PRJNA588137_S_NODE_4995_length_274_cov_1.149254_g4962_i0 PRJNA588137 4995 274 1.149254 3.14895596 Metazoa 33208 Porifera other_Eukaryota 169 3.19e-49   NR CCQ18610.1 27933 g4962 i0 86.8 85.6861313868613 91 12 99.6 0 274 2 29 119 CCQ18610.1 ribosomal protein RPL1/RPL2/RL4L4 [Sycon ciliatum] diamond 23478 169 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
30774939 30774939 PRJNA588137_S_NODE_3974_length_295_cov_1.040541_g3941_i0 PRJNA588137 3974 295 1.040541 3.06959595 Suberites domuncula 55567 Porifera other_Eukaryota 132 6.379999999999998e-35   NR AAX48834.1 55567 g3941 i0 72.2 2.97966101694915 97 26 98.6 1 291 1 115 210 AAX48834.1 L4/L1 [Suberites domuncula] diamond 879 132 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites domuncula

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;