RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA588137", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA588137 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5668473 5668473 PRJNA588137_S_NODE_2285_length_349_cov_1.673913_g2252_i0 PRJNA588137 2285 349 1.673913 5.84195637 Mucor mucedo 29922 Fungi Fungi 117 1.1500000000000002e-21   NTclustered gi|2324032737|ref|XM_051605504.1| 29922 g2252 i0 77.665 2.83094555873926 197 41 56 3 5 200 282 476 Mucor mucedo ribosomal protein L6e-domain-containing protein (EV154DRAFT_558689), partial mRNA blastn 988 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor mucedo
31628280 31628280 PRJNA588137_S_NODE_5136_length_271_cov_1.166667_g5103_i0 PRJNA588137 5136 271 1.166667 3.16166757 Ambispora leptoticha 144679 Fungi Fungi 57 4.75e-7   NR CAG8553745.1 144679 g5103 i0 41.6 2.71217712177122 77 33 79.7 4 54 269 199 268 CAG8553745.1 4727_t:CDS:10 [Ambispora leptoticha] diamond 735 57 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Archaeosporales Ambisporaceae Ambispora Ambispora leptoticha

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;