RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA588137" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA588137 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11341861 11341861 PRJNA588137_S_NODE_9129_length_245_cov_0.895349_g9096_i0 PRJNA588137 9129 245 0.895349 2.19360505 Candidatus Sericytochromatia bacterium 2762020 Bacteria Bacteria 133 3.89e-34   NR MEZ0370246.1 2762020 g9096 i0 91.5 1.73877551020408 71 6 86.9 0 1 213 61 131 MEZ0370246.1 ATP-dependent helicase [Candidatus Sericytochromatia bacterium] diamond 426 133 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati   Candidatus Sericytochromatia       Candidatus Sericytochromatia bacterium
17142420 17142420 PRJNA588137_S_NODE_8434_length_247_cov_0.879310_g8401_i0 PRJNA588137 8434 247 0.87931 2.1718957 Allocoleopsis franciscana 2886352 Bacteria Bacteria 357 4.22e-94   NTclustered gi|428249989|gb|CP003630.1| 1173027 g8401 i0 95.909 1.12145748987854 220 9 89 0 28 247 3835018 3835237 Allocoleopsis franciscana PCC 7113, complete genome blastn 277 357 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Coleofasciculales Coleofasciculaceae Allocoleopsis Allocoleopsis franciscana
26667908 26667908 PRJNA588137_S_NODE_2761_length_330_cov_0.665370_g2728_i0 PRJNA588137 2761 330 0.66537 2.195721 Vulcanococcus sp. 2856995 Bacteria Bacteria 43.5 0.049   NR WP_296450979.1 2856995 g2728 i0 27.8 1.76363636363636 97 62 85.5 2 22 303 69 160 WP_296450979.1 tRNA epoxyqueuosine(34) reductase QueG [Vulcanococcus sp.] diamond 582 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Synechococcales Synechococcaceae Vulcanococcus Vulcanococcus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;