contig_metadata
7 rows where bioproject = "PRJNA588137" and tax_clade = "Bacteria candidate phyla"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20966940 | 20966940 | PRJNA588137_S_NODE_7417_length_249_cov_0.875000_g7384_i0 | PRJNA588137 | 7417 | 249 | 0.875 | 2.17875 | Candidatus Nanosynbacter sp. BB002 | 3393757 | Bacteria | Bacteria | 416 | 6.939999999999999e-112 | NTclustered | gi|2692798772|gb|CP146064.1| | 3393757 | g7384 | i0 | 96.787 | 32.285140562249 | 249 | 8 | 100 | 0 | 1 | 249 | 347748 | 347996 | Candidatus Nanosynbacter sp. BB002 chromosome, complete genome | blastn | 8039 | 416 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadia | Candidatus Nanosynbacterales | Candidatus Nanosynbacteraceae | Candidatus Nanosynbacter | Candidatus Nanosynbacter sp. BB002 | ||
| 27111133 | 27111133 | PRJNA588137_S_NODE_7102_length_250_cov_0.870056_g7069_i0 | PRJNA588137 | 7102 | 250 | 0.870056 | 2.17514 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 72.4 | 1.48e-12 | NR | MBH1980306.1 | 2026720 | g7069 | i0 | 50 | 0.984 | 82 | 40 | 98.4 | 1 | 5 | 250 | 453 | 533 | MBH1980306.1 hypothetical protein [Candidatus Saccharibacteria bacterium] | diamond | 246 | 72.4 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 27900759 | 27900759 | PRJNA588137_S_NODE_10725_length_242_cov_0.911243_g10692_i0 | PRJNA588137 | 10725 | 242 | 0.911243 | 2.20520806 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 42.7 | 0.0373 | NR | NCU29271.1 | 2026720 | g10692 | i0 | 37.9 | 0.818181818181818 | 66 | 38 | 81.8 | 1 | 225 | 28 | 618 | 680 | NCU29271.1 SGNH/GDSL hydrolase family protein [Candidatus Saccharibacteria bacterium] | diamond | 198 | 42.7 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 29258344 | 29258344 | PRJNA588137_S_NODE_8269_length_247_cov_0.885057_g8236_i0 | PRJNA588137 | 8269 | 247 | 0.885057 | 2.18609079 | Candidatus Altimarinota bacterium | 2044595 | Bacteria | Bacteria | 158 | 3.01e-44 | NR | RKW21486.1 | 2044595 | g8236 | i0 | 97.5 | 0.983805668016194 | 81 | 2 | 98.4 | 0 | 3 | 245 | 136 | 216 | RKW21486.1 MAG: ribosome biogenesis GTPase Der [Candidatus Altimarinota bacterium] | diamond | 243 | 158 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Altimarinota | Candidatus Altimarinota bacterium | ||||||
| 30187848 | 30187848 | PRJNA588137_S_NODE_11272_length_241_cov_0.916667_g11239_i0 | PRJNA588137 | 11272 | 241 | 0.916667 | 2.20916747 | Bacteria | 2 | Bacteria | Bacteria | 94 | 8.1e-23 | NR | MCA9338373.1 | 2026720 | g11239 | i0 | 56 | 2.73858921161826 | 75 | 33 | 93.4 | 0 | 9 | 233 | 28 | 102 | MCA9338373.1 thioredoxin [Candidatus Saccharibacteria bacterium] | diamond | 660 | 94 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 30806418 | 30806418 | PRJNA588137_S_NODE_7014_length_250_cov_0.870056_g6981_i0 | PRJNA588137 | 7014 | 250 | 0.870056 | 2.17514 | Candidatus Saccharimonadota bacterium | 2026720 | Bacteria | Bacteria | 139 | 2.53e-39 | NR | NLA43183.1 | 2026720 | g6981 | i0 | 84.1 | 0.984 | 82 | 13 | 98.4 | 0 | 3 | 248 | 92 | 173 | NLA43183.1 hypothetical protein [Candidatus Saccharibacteria bacterium] | diamond | 246 | 139 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharimonadota bacterium | ||||||
| 32274743 | 32274743 | PRJNA588137_S_NODE_9198_length_245_cov_0.895349_g9165_i0 | PRJNA588137 | 9198 | 245 | 0.895349 | 2.19360505 | Bacillati | 1783272 | Bacteria | Bacteria | 114 | 3.2200000000000004e-27 | NR | KKW02202.1 | 1619071 | g9165 | i0 | 67.1 | 5.76734693877551 | 79 | 26 | 96.7 | 0 | 1 | 237 | 109 | 187 | KKW02202.1 MAG: hypothetical protein UY35_C0018G0012 [Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9] | diamond | 1413 | 115 | 0.991304347826087 | Bacteria | Bacteria candidate phyla | Candidatus Saccharimonadota | Candidatus Saccharibacteria bacterium GW2011_GWC2_48_9 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;