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contig_metadata

13 rows where bioproject = "PRJNA588137" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 13 ✖

bioproject 1

  • PRJNA588137 · 13 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5668469 5668469 PRJNA588137_S_NODE_1985_length_367_cov_1.309524_g1952_i0 PRJNA588137 1985 367 1.309524 4.80595308 Eumycetozoa 142796 Evosea other_Eukaryota 183 2.489999999999999e-55   NR ABL84200.1 5791 g1952 i0 78.9 6.00817438692098 123 25 99.7 1 2 367 5 127 ABL84200.1 14-3-3-like protein [Physarum polycephalum] diamond 2205 184 0.994565217391304 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
5668498 5668498 PRJNA588137_S_NODE_585_length_600_cov_1.366224_g554_i0 PRJNA588137 585 600 1.366224 8.197344 Evosea 2605435 Evosea other_Eukaryota 335 3.9699999999999996e-112   NR AAB69705.1 44689 g554 i0 82.4 11.94 199 35 99.5 0 3 599 77 275 AAB69705.1 protein synthesis elongation factor 1-alpha, partial [Dictyostelium discoideum] diamond 7164 337 0.99406528189911 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
19691185 19691185 PRJNA588137_S_NODE_816_length_519_cov_1.322870_g783_i0 PRJNA588137 816 519 1.32287 6.8656953 Polysphondylium violaceum 133409 Evosea other_Eukaryota 175 1.74e-50   NR KAF2078127.1 133409 g783 i0 50.3 2.89595375722543 173 78 98.3 3 512 3 104 271 KAF2078127.1 hypothetical protein CYY_000598 [Polysphondylium violaceum] diamond 1503 175 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
27332731 27332731 PRJNA588137_S_NODE_7003_length_250_cov_0.870056_g6970_i0 PRJNA588137 7003 250 0.870056 2.17514 Entamoeba dispar SAW76 46681 Evosea other_Eukaryota 98.6 5.759999999999999e-23   NR XP_001736714.1 370354 g6970 i0 56 5.004 84 32 99.6 2 2 250 98 177 XP_001736714.1 casein kinase, putative [Entamoeba dispar SAW760] diamond 1251 98.6 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
27553384 27553384 PRJNA588137_S_NODE_7224_length_249_cov_0.875000_g7191_i0 PRJNA588137 7224 249 0.875 2.17875 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 58.2 1.45e-7   NR XP_012751539.1 1410327 g7191 i0 40.3 2.66265060240964 72 43 86.7 0 217 2 231 302 XP_012751539.1 hypothetical protein SAMD00019534_087280 [Acytostelium subglobosum LB1] diamond 663 58.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
27585178 27585178 PRJNA588137_S_NODE_4704_length_279_cov_2.475728_g4671_i0 PRJNA588137 4704 279 2.475728 6.90728112 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 147 7.26e-43   NR XP_004349731.1 1257118 g4671 i0 70.7 0.989247311827957 92 27 98.9 0 4 279 15 106 XP_004349731.1 ribosomal protein S13p/S18e, putative [Acanthamoeba castellanii str. Neff] diamond 276 147 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27900760 27900760 PRJNA588137_S_NODE_6645_length_251_cov_0.865169_g6612_i0 PRJNA588137 6645 251 0.865169 2.17157419 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.8 4.21e-11   NR XP_004337970.1 1257118 g6612 i0 42.4 1.01593625498008 85 44 95.6 1 8 247 181 265 XP_004337970.1 CBS domain containing protein [Acanthamoeba castellanii str. Neff] diamond 255 67.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28735356 28735356 PRJNA588137_S_NODE_9687_length_244_cov_0.900585_g9654_i0 PRJNA588137 9687 244 0.900585 2.1974274 Acytosteliales 2058181 Evosea other_Eukaryota 106 1.22e-24   NR XP_004362768.1 261658 g9654 i0 64.6 2.91393442622951 79 26 97.1 2 239 3 408 484 XP_004362768.1 class VII unconventional myosin [Cavenderia fasciculata] diamond 711 107 0.990654205607477 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
29668705 29668705 PRJNA588137_S_NODE_8070_length_247_cov_1.017241_g8037_i0 PRJNA588137 8070 247 1.017241 2.51258527 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 82.8 2.47e-16   NR XP_012755339.1 1410327 g8037 i0 48.8 1.9919028340081 82 42 99.6 0 246 1 100 181 XP_012755339.1 hypothetical protein SAMD00019534_043950 [Acytostelium subglobosum LB1] diamond 492 82.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29682223 29682223 PRJNA588137_S_NODE_7530_length_249_cov_0.875000_g7497_i0 PRJNA588137 7530 249 0.875 2.17875 Acytosteliales 2058181 Evosea other_Eukaryota 60.1 1.23e-8   NR XP_004367175.1 261658 g7497 i0 41.5 8.36144578313253 65 35 78.3 1 249 55 89 150 XP_004367175.1 uncharacterized protein DFA_07312 [Cavenderia fasciculata] diamond 2082 60.5 0.993388429752066 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
30427672 30427672 PRJNA588137_S_NODE_10193_length_243_cov_0.905882_g10160_i0 PRJNA588137 10193 243 0.905882 2.20129326 Dictyostelium discoideum AX4 352472 Evosea other_Eukaryota 88.2 3.09e-18   NR XP_642645.1 352472 g10160 i0 58.8 1.54320987654321 68 28 84 0 239 36 343 410 XP_642645.1 ammonium transporter [Dictyostelium discoideum AX4] diamond 375 88.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
31121968 31121968 PRJNA588137_S_NODE_7255_length_249_cov_0.875000_g7222_i0 PRJNA588137 7255 249 0.875 2.17875 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 43.1 0.029   NR XP_004184837.1 370355 g7222 i0 32.9 1.98795180722892 82 50 94 3 15 248 425 505 XP_004184837.1 hypothetical protein EIN_040850 [Entamoeba invadens IP1] diamond 495 43.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
31691540 31691540 PRJNA588137_S_NODE_5397_length_266_cov_1.196891_g5364_i0 PRJNA588137 5397 266 1.196891 3.18373006 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 136 1.04e-38   NR XP_004333797.1 1257118 g5364 i0 80.7 6.94736842105263 88 15 99.2 1 1 264 32 117 XP_004333797.1 ADPribosylation factor, putative [Acanthamoeba castellanii str. Neff] diamond 1848 136 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;