RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27806375 27806375 PRJNA577580_P_NODE_10804_length_280_cov_1.130435_g10726_i0 PRJNA577580 10804 280 1.130435 3.165218 Nanobdellota archaeon 2026764 Archaea Archaea 59.3 8.79e-8   NR MEA3329733.1 2026764 g10726 i0 40 0.964285714285714 90 42 92.1 3 1 258 310 391 MEA3329733.1 dockerin type I domain-containing protein [Nanoarchaeota archaeon] diamond 270 59.3 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28469443 28469443 PRJNA577580_P_NODE_8986_length_303_cov_2.595652_g8908_i0 PRJNA577580 8986 303 2.595652 7.86482556 Nanobdellota archaeon 2026764 Archaea Archaea 55.5 2.95e-7   NR MBU1246094.1 2026764 g8908 i0 31.6 0.97029702970297 98 61 93.1 3 282 1 18 113 MBU1246094.1 hypothetical protein [Nanoarchaeota archaeon] diamond 294 55.5 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
28847938 28847938 PRJNA577580_P_NODE_1288_length_793_cov_2.748611_g1219_i0 PRJNA577580 1288 793 2.748611 21.79648523 Nanobdellota archaeon 2026764 Archaea Archaea 51.2 6.62e-5   NR MCA9460456.1 2026764 g1219 i0 45.2 0.158890290037831 42 23 15.9 0 641 516 5 46 MCA9460456.1 hypothetical protein [Nanoarchaeota archaeon] diamond 126 51.2 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;