RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580" and tax_phylum = "Candidatus Omnitrophota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Omnitrophota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31090706 31090706 PRJNA577580_P_NODE_11635_length_270_cov_4.730964_g11557_i0 PRJNA577580 11635 270 4.730964 12.7736028 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 42 0.0375   NR MFA6281890.1 2035772 g11557 i0 45.3 0.588888888888889 53 28 58.9 1 224 66 25 76 MFA6281890.1 30S ribosomal protein S11 [Candidatus Omnitrophota bacterium] diamond 159 42 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31216701 31216701 PRJNA577580_P_NODE_1695_length_698_cov_3.667200_g1621_i0 PRJNA577580 1695 698 3.6672 25.597056 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 54.3 1.83e-4   NR MFC1510612.1 2035772 g1621 i0 40.6 0.275071633237822 64 38 27.5 0 538 347 16 79 MFC1510612.1 DUF5060 domain-containing protein [Candidatus Omnitrophota bacterium] diamond 192 54.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
31628255 31628255 PRJNA577580_P_NODE_17076_length_228_cov_2.335484_g16998_i0 PRJNA577580 17076 228 2.335484 5.32490352 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 64.3 5.4e-10   NR MDD5070522.1 2035772 g16998 i0 44.9 0.907894736842105 69 38 90.8 0 228 22 160 228 MDD5070522.1 Hsp70 family protein [Candidatus Omnitrophota bacterium] diamond 207 64.3 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;