RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA577580", tax_kingdom = "Promethearchaeati" and tax_phylum = "Promethearchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Promethearchaeota · 2 ✖

tax_kingdom 1

  • Promethearchaeati · 2 ✖

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26731105 26731105 PRJNA577580_P_NODE_6541_length_352_cov_1.376344_g6463_i0 PRJNA577580 6541 352 1.376344 4.84473088 Promethearchaeia archaeon 3067280 Archaea Archaea 169 3.19e-48   NR HMF32030.1 3067280 g6463 i0 64.7 2.96590909090909 116 41 98.9 0 3 350 291 406 HMF32030.1 acetyl-CoA C-acyltransferase [Promethearchaeia archaeon] diamond 1044 169 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon
31754744 31754744 PRJNA577580_P_NODE_1777_length_682_cov_1.748768_g1702_i0 PRJNA577580 1777 682 1.748768 11.92659776 Promethearchaeia archaeon 3067280 Archaea Archaea 182 2.47e-53   NR MEE9377748.1 3067280 g1702 i0 50.3 0.804985337243402 183 81 80.5 4 6 554 98 270 MEE9377748.1 class I SAM-dependent methyltransferase [Promethearchaeia archaeon] diamond 549 182 1 Archaea   Promethearchaeati Promethearchaeota Promethearchaeia       Promethearchaeia archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;