RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA577580", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA577580 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14592841 14592841 PRJNA577580_P_NODE_11252_length_274_cov_2.243781_g11174_i0 PRJNA577580 11252 274 2.243781 6.14795994 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 129 3.2099999999999995e-35   NR ETO13672.1 46433 g11174 i0 84.7 4.7956204379562 72 11 78.8 0 57 272 85 156 ETO13672.1 RNA binding protein [Reticulomyxa filosa] diamond 1314 129 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28342948 28342948 PRJNA577580_P_NODE_13866_length_252_cov_0.871508_g13788_i0 PRJNA577580 13866 252 0.871508 2.19620016 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 93.6 1.68e-20   NR ETO16285.1 46433 g13788 i0 48.2 1.01190476190476 85 41 97.6 1 250 5 229 313 ETO16285.1 phytanoyl-CoA dioxygenase (PhyH) family protein [Reticulomyxa filosa] diamond 255 93.6 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
28974559 28974559 PRJNA577580_P_NODE_14008_length_251_cov_0.876404_g13930_i0 PRJNA577580 14008 251 0.876404 2.19977404 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 111 2.22e-26   NR ETO35216.1 46433 g13930 i0 57.8 1.9840637450199201 83 35 99.2 0 1 249 455 537 ETO35216.1 coagulation factor 5/8 type domain-containing protein [Reticulomyxa filosa] diamond 498 111 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
29006441 29006441 PRJNA577580_P_NODE_8008_length_319_cov_1.796748_g7930_i0 PRJNA577580 8008 319 1.796748 5.73162612 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 70.5 1.67e-11   NR ETO01351.1 46433 g7930 i0 55.7 0.573667711598746 61 27 57.4 0 183 1 55 115 ETO01351.1 NADPH-cytochrome-P450 oxidoreductase [Reticulomyxa filosa] diamond 183 70.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
30996015 30996015 PRJNA577580_P_NODE_15754_length_244_cov_1.368421_g15676_i0 PRJNA577580 15754 244 1.368421 3.33894724 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.34e-13   NR ETO36349.1 46433 g15676 i0 49.4 1.99180327868852 81 40 98.4 1 3 242 114 194 ETO36349.1 Popeye domain-containing protein [Reticulomyxa filosa] diamond 486 74.7 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
31849628 31849628 PRJNA577580_P_NODE_9117_length_301_cov_2.114035_g9039_i0 PRJNA577580 9117 301 2.114035 6.36324535 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 58.5 1.06e-7   NR ETO35057.1 46433 g9039 i0 33 1.9734219269103 91 54 83.7 2 23 274 84 174 ETO35057.1 hypothetical protein RFI_02018 [Reticulomyxa filosa] diamond 594 58.5 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32640082 32640082 PRJNA577580_P_NODE_10680_length_281_cov_1.692308_g10602_i0 PRJNA577580 10680 281 1.692308 4.75538548 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 61.2 1.08e-8   NR ETO28914.1 46433 g10602 i0 56.9 0.544483985765125 51 22 54.4 0 18 170 179 229 ETO28914.1 hypothetical protein RFI_08212, partial [Reticulomyxa filosa] diamond 153 61.2 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32685111 32685111 PRJNA577580_P_NODE_10220_length_287_cov_1.420561_g10142_i0 PRJNA577580 10220 287 1.420561 4.07701007 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0245   NR ETO34968.1 46433 g10142 i0 38.7 2.0801393728223 62 36 62.7 1 30 209 553 614 ETO34968.1 hypothetical protein RFI_02103, partial [Reticulomyxa filosa] diamond 597 43.9 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
32860718 32860718 PRJNA577580_P_NODE_12480_length_262_cov_2.476190_g12402_i0 PRJNA577580 12480 262 2.47619 6.4876178 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 55.1 1.79e-6   NR ETO12101.1 46433 g12402 i0 41.7 0.687022900763359 60 34 67.6 1 84 260 46 105 ETO12101.1 hypothetical protein RFI_25276 [Reticulomyxa filosa] diamond 180 55.1 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;