RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where bioproject = "PRJNA577580", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 33 ✖

tax_clade 1

  • Sar · 33 ✖

bioproject 1

  • PRJNA577580 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2413537 2413537 PRJNA577580_P_NODE_6582_length_351_cov_1.258993_g6504_i0 PRJNA577580 6582 351 1.258993 4.41906543 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 211 5.17e-50   NTclustered gi|2785772740|ref|XM_067210427.1| 117008 g6504 i0 83.19 5.9031339031339 232 37 66 2 102 332 262 492 Cryptosporidium andersoni 40s ribosomal protein S2 (cand_001790), partial mRNA blastn 2072 211 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium andersoni
3114909 3114909 PRJNA577580_P_NODE_13403_length_254_cov_1.127072_g13325_i0 PRJNA577580 13403 254 1.127072 2.86276288 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.023   NTclustered gi|1620175782|ref|XM_028683395.1| 880535 g13325 i0 100 0.220472440944882 28 0 11 0 227 254 1486 1459 Plasmodium sp. gorilla clade G2 DEAD/DEAH box ATP-dependent RNA helicase, putative (PADL01_1242000), partial mRNA blastn 56 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
8217233 8217233 PRJNA577580_P_NODE_4547_length_420_cov_2.492795_g4469_i0 PRJNA577580 4547 420 2.492795 10.469739 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 137 1.09e-27   NTclustered gi|1472918886|ref|XR_003297360.1| 88456 g4469 i0 81.143 9.67619047619048 175 29 41 4 97 270 759 930 PREDICTED: Cyclospora cayetanensis large subunit ribosomal RNA (LOC113146729), rRNA blastn 4064 137 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
10066667 10066667 PRJNA577580_P_NODE_6948_length_341_cov_1.705224_g6870_i0 PRJNA577580 6948 341 1.705224 5.81481384 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 178 3.16e-54   NR XP_013235738.1 5802 g6870 i0 77.1 22.2932551319648 105 24 92.4 0 24 338 98 202 XP_013235738.1 Cyclin-dependent serine/threonine protein kinase, partial [Eimeria tenella] diamond 7602 178 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
12617175 12617175 PRJNA577580_P_NODE_7290_length_333_cov_1.930769_g7212_i0 PRJNA577580 7290 333 1.930769 6.42946077 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 89.8 2.39e-13   NTclustered gi|400365274|gb|JQ684659.1| 5833 g7212 i0 88.158 19.0570570570571 76 7 23 2 1 75 1568 1642 Plasmodium falciparum isolate LF3 28S ribosomal RNA gene, partial sequence blastn 6346 89.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
15866681 15866681 PRJNA577580_P_NODE_15833_length_244_cov_0.912281_g15755_i0 PRJNA577580 15833 244 0.912281 2.22596564 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 279 9.27e-71   NTclustered gi|1620150562|ref|XM_028678648.1| 85471 g15755 i0 87.398 88.3524590163934 246 27 100 4 1 244 353 596 Plasmodium relictum polyubiquitin, putative (PRELSG_1312500), partial mRNA blastn 21558 279 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
15866712 15866712 PRJNA577580_P_NODE_3953_length_453_cov_3.507895_g3875_i0 PRJNA577580 3953 453 3.507895 15.89076435 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 82.4 5.6e-11   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g3875 i0 84.524 7.89845474613687 84 11 18 2 111 193 4020 4102 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 3578 82.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei
18415945 18415945 PRJNA577580_P_NODE_275_length_1419_cov_13.002972_g245_i0 PRJNA577580 275 1419 13.002972 184.51217268 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 673 1.04e-239   NR XP_625871.1 353152 g245 i0 69.2 53.0126849894292 451 134 94.5 2 1418 78 10 459 XP_625871.1 alpha tubulin, partial [Cryptosporidium parvum Iowa II] diamond 75225 679 0.991163475699558 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium parvum
18415960 18415960 PRJNA577580_P_NODE_4175_length_441_cov_1.701087_g4097_i0 PRJNA577580 4175 441 1.701087 7.50179367 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 142 3.03e-36   NR KAJ1611513.1 195482 g4097 i0 46.5 21.8707482993197 144 75 96.6 2 14 439 22 165 KAJ1611513.1 putative OSK4 [Cryptosporidium canis] diamond 9645 143 0.993006993006993 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium canis
18415970 18415970 PRJNA577580_P_NODE_5275_length_389_cov_3.183544_g5197_i0 PRJNA577580 5275 389 3.183544 12.38398616 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 180 1.7e-55   NR UKK01874.1 68886 g5197 i0 66.7 14.9537275064267 129 43 99.5 0 389 3 12 140 UKK01874.1 calmodulin [Theileria orientalis] diamond 5817 180 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
19690492 19690492 PRJNA577580_P_NODE_4376_length_429_cov_2.859551_g4298_i0 PRJNA577580 4376 429 2.859551 12.26747379 root 1 Root_unresolved Root_unresolved 223 2.46e-71   NR XP_954481.1 5874 g4298 i0 72.6 60.0629370629371 146 37 100 1 1 429 79 224 XP_954481.1 cyclophilin 1, putative [Theileria annulata] diamond 25767 223 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
23516486 23516486 PRJNA577580_P_NODE_6759_length_346_cov_1.230769_g6681_i0 PRJNA577580 6759 346 1.230769 4.25846074 root 1 Root_unresolved Root_unresolved 198 9.479999999999999e-61   NR XP_013232791.1 5802 g6681 i0 81.6 12.606936416185 114 20 98 1 7 345 153 266 XP_013232791.1 20 kDa cyclophilin precursor, putative [Eimeria tenella] diamond 4362 200 0.99 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
24790159 24790159 PRJNA577580_P_NODE_1520_length_737_cov_6.534639_g1446_i0 PRJNA577580 1520 737 6.534639 48.16028943 Plasmodium sp. gorilla clade G2 880535 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.021   NTclustered gi|1620181669|ref|XM_028684540.1| 880535 g1446 i0 100 0.039348710990502 29 0 4 0 27 55 891 863 Plasmodium sp. gorilla clade G2 lipase, putative (PADL01_1426900), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium sp. gorilla clade G2
27079665 27079665 PRJNA577580_P_NODE_7322_length_332_cov_4.965251_g7244_i0 PRJNA577580 7322 332 4.965251 16.48463332 Toxoplasma gondii COUG 1074873 SAR_Eukaryotes SAR_Eukaryotes 56.2 1.39e-6   NR PIM02536.1 1074873 g7244 i0 31.3 1.01204819277108 112 74 98.5 2 1 327 47 158 PIM02536.1 hypothetical protein TGCOUG_240610 [Toxoplasma gondii COUG] diamond 336 56.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
27155992 27155992 PRJNA577580_P_NODE_16382_length_242_cov_0.923077_g16304_i0 PRJNA577580 16382 242 0.923077 2.23384634 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 44.3 0.0109   NR CDI76316.1 51316 g16304 i0 33.8 6.3595041322314 80 43 90.5 3 7 225 1967 2043 CDI76316.1 thrombospondin type 1 domain-containing protein, putative [Eimeria praecox] diamond 1539 44.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria praecox
27332712 27332712 PRJNA577580_P_NODE_3763_length_464_cov_3.813299_g3685_i0 PRJNA577580 3763 464 3.813299 17.69370736 Theileria orientalis strain Shintoku 869250 SAR_Eukaryotes SAR_Eukaryotes 248 4.68e-78   NR XP_009692141.1 869250 g3685 i0 79.1 6.70474137931035 148 31 95.7 0 3 446 293 440 XP_009692141.1 enolase [Theileria orientalis strain Shintoku] diamond 3111 248 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
27377889 27377889 PRJNA577580_P_NODE_3063_length_514_cov_4.226757_g2985_i0 PRJNA577580 3063 514 4.226757 21.72553098 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 237 8.85e-71   NR XP_029219307.1 94643 g2985 i0 67.7 7.52334630350195 161 52 94 0 484 2 93 253 XP_029219307.1 putative polyadenylate binding protein [Besnoitia besnoiti] diamond 3867 239 0.99163179916318 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27900737 27900737 PRJNA577580_P_NODE_5385_length_385_cov_1.907051_g5307_i0 PRJNA577580 5385 385 1.907051 7.34214635 Plasmodium inui San Antonio 1 1237626 SAR_Eukaryotes SAR_Eukaryotes 62 2.07e-8   NR XP_008814887.1 1237626 g5307 i0 44.4 1.28571428571429 81 43 63.1 1 278 36 8 86 XP_008814887.1 CMGC/CDK protein kinase [Plasmodium inui San Antonio 1] diamond 495 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium inui
28184843 28184843 PRJNA577580_P_NODE_5666_length_376_cov_2.884488_g5588_i0 PRJNA577580 5666 376 2.884488 10.84567488 Plasmodium vivax 5855 SAR_Eukaryotes SAR_Eukaryotes 64.7 3.49e-9   NR XP_001614614.1 5855 g5588 i0 32.2 0.965425531914894 121 58 96.5 3 370 8 17 113 XP_001614614.1 hypothetical protein, conserved [Plasmodium vivax] diamond 363 64.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vivax
28324757 28324757 PRJNA577580_P_NODE_8886_length_305_cov_1.280172_g8808_i0 PRJNA577580 8886 305 1.280172 3.9045246 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 51.6 5.53e-5   NR ETW59017.1 5835 g8808 i0 51.8 5.95081967213115 56 23 55.1 2 51 218 98 149 ETW59017.1 hypothetical protein PFMC_05205 [Plasmodium falciparum CAMP/Malaysia] diamond 1815 52 0.992307692307692 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
29303615 29303615 PRJNA577580_P_NODE_15689_length_244_cov_2.549708_g15611_i0 PRJNA577580 15689 244 2.549708 6.22128752 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0203   NR KNC35436.1 580058 g15611 i0 34.3 4.11885245901639 67 39 82.4 2 230 30 1839 1900 KNC35436.1 hypothetical protein PFLG_00446 [Plasmodium falciparum RAJ116] diamond 1005 43.5 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
29416338 29416338 PRJNA577580_P_NODE_8449_length_312_cov_1.121339_g8371_i0 PRJNA577580 8449 312 1.121339 3.49857768 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 48.1 7.45e-4   NR KAF8821352.1 476202 g8371 i0 47.8 0.442307692307692 46 24 44.2 0 113 250 33 78 KAF8821352.1 ribosomal protein l7/l12 c-terminal domain-containing protein [Cardiosporidium cionae] diamond 138 48.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29713740 29713740 PRJNA577580_P_NODE_4330_length_432_cov_1.688022_g4252_i0 PRJNA577580 4330 432 1.688022 7.29225504 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 177 5e-52   NR XP_013248346.1 5801 g4252 i0 59.6 26.0277777777778 146 54 98.6 2 431 6 178 322 XP_013248346.1 hydroxyacylglutathione hydrolase, putative [Eimeria acervulina] diamond 11244 177 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
29745447 29745447 PRJNA577580_P_NODE_930_length_909_cov_5.787081_g867_i0 PRJNA577580 930 909 5.787081 52.60456629 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 114 1.51e-25   NR EPR61882.1 507601 g867 i0 38.5 2.42904290429043 169 87 54.1 8 652 161 145 301 EPR61882.1 hypothetical protein TGGT1_234507 [Toxoplasma gondii GT1] diamond 2208 115 0.991304347826087 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
30061369 30061369 PRJNA577580_P_NODE_15511_length_245_cov_1.331395_g15433_i0 PRJNA577580 15511 245 1.331395 3.26191775 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.0057   NR KAK1442108.1 33632 g15433 i0 30.9 3.37959183673469 68 47 83.3 0 3 206 255 322 KAK1442108.1 hypothetical protein BgAZ_401380 [Babesia gibsoni] diamond 828 45.4 0.993392070484582 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia gibsoni
30092939 30092939 PRJNA577580_P_NODE_11512_length_272_cov_1.492462_g11434_i0 PRJNA577580 11512 272 1.492462 4.05949664 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 92.4 1.42e-19   NR XP_013247207.1 5801 g11434 i0 69.4 4.42279411764706 62 19 68.4 0 259 74 327 388 XP_013247207.1 hypothetical protein, conserved [Eimeria acervulina] diamond 1203 93.2 0.991416309012876 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
30205777 30205777 PRJNA577580_P_NODE_7312_length_333_cov_1.180769_g7234_i0 PRJNA577580 7312 333 1.180769 3.93196077 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 57.4 7.56e-7   NR OEH74405.1 88456 g7234 i0 49.1 0.495495495495495 55 23 45 2 12 161 430 484 OEH74405.1 microneme protein [Cyclospora cayetanensis] diamond 165 57.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
31185217 31185217 PRJNA577580_P_NODE_14675_length_248_cov_2.177143_g14597_i0 PRJNA577580 14675 248 2.177143 5.39931464 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 103 3.89e-24   NR XP_013232970.1 5802 g14597 i0 64.6 1.98387096774194 82 29 99.2 0 247 2 215 296 XP_013232970.1 NAD-specific glutamate dehydrogenase, putative [Eimeria tenella] diamond 492 103 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
31343670 31343670 PRJNA577580_P_NODE_15156_length_246_cov_2.768786_g15078_i0 PRJNA577580 15156 246 2.768786 6.81121356 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 56.2 6.25e-7   NR CAL7864368.1 1344799 g15078 i0 50 1.57317073170732 42 21 51.2 0 119 244 258 299 CAL7864368.1 unnamed protein product [Sarcocystis calchasi] diamond 387 56.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31673302 31673302 PRJNA577580_P_NODE_1397_length_765_cov_4.777457_g1328_i0 PRJNA577580 1397 765 4.777457 36.54754605 root 1 Root_unresolved Root_unresolved 125 2.08e-31   NR XP_067198880.1 515981 g1328 i0 33.3 7.04705882352941 198 122 76.1 4 743 162 5 196 XP_067198880.1 superoxide dismutase [Cryptosporidium ryanae] diamond 5391 125 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
31754750 31754750 PRJNA577580_P_NODE_6817_length_344_cov_2.059041_g6739_i0 PRJNA577580 6817 344 2.059041 7.08310104 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 64.7 1.03e-9   NR XP_013352069.1 44415 g6739 i0 37.7 0.671511627906977 77 47 67.2 1 315 85 93 168 XP_013352069.1 thioredoxin, putative [Eimeria mitis] diamond 231 64.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
31817993 31817993 PRJNA577580_P_NODE_4837_length_407_cov_2.500000_g4759_i0 PRJNA577580 4837 407 2.5 10.175 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 62 4.25e-8   NR XP_028535249.1 85471 g4759 i0 34.4 2.18918918918919 125 68 84.8 4 359 15 736 856 XP_028535249.1 vacuolar transporter chaperone, putative [Plasmodium relictum] diamond 891 62 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
31976163 31976163 PRJNA577580_P_NODE_11158_length_275_cov_2.772277_g11080_i0 PRJNA577580 11158 275 2.772277 7.62376175 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 159 3.25e-45   NR XP_013252537.1 5801 g11080 i0 76.9 1.98545454545455 91 21 99.3 0 274 2 14 104 XP_013252537.1 phosphoenolpyruvate carboxykinase, putative [Eimeria acervulina] diamond 546 159 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;