RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580", tax_clade = "PVC group" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 3 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 3 ✖

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29493093 29493093 PRJNA577580_P_NODE_9290_length_299_cov_1.353982_g9212_i0 PRJNA577580 9290 299 1.353982 4.04840618 Pseudomonadati 3379134 Bacteria Bacteria 53.5 4.77e-6   NR MBQ6102115.1 2212473 g9212 i0 35.4 3 99 63 99.3 1 1 297 72 169 MBQ6102115.1 TMEM43 family protein [Kiritimatiellia bacterium] diamond 897 53.5 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
30553459 30553459 PRJNA577580_P_NODE_9373_length_298_cov_1.222222_g9295_i0 PRJNA577580 9373 298 1.222222 3.64222156 Pontiellaceae bacterium B1224 3035704 Bacteria Bacteria 121 7.519999999999999e-31   NR MDF7799310.1 3035704 g9295 i0 62.5 1.93288590604027 96 36 96.6 0 297 10 98 193 MDF7799310.1 Gfo/Idh/MocA family oxidoreductase [Pontiellaceae bacterium B1224] diamond 576 121 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales Pontiellaceae   Pontiellaceae bacterium B1224
32261322 32261322 PRJNA577580_P_NODE_15598_length_245_cov_0.906977_g15520_i0 PRJNA577580 15598 245 0.906977 2.22209365 Kiritimatiellota bacterium B12222 3040511 Bacteria Bacteria 60.1 2.77e-8   NR WFB36968.1 3040511 g15520 i0 37 2.97551020408163 81 50 99.2 1 1 243 292 371 WFB36968.1 Gfo/Idh/MocA family oxidoreductase [Kiritimatiellota bacterium B12222] diamond 729 60.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota         Kiritimatiellota bacterium B12222

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;