RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA577580", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_superkingdom = "Bacteria"

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tax_superkingdom 1

  • Bacteria · 2 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA577580 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4391487 4391487 PRJNA577580_P_NODE_15924_length_244_cov_0.912281_g15846_i0 PRJNA577580 15924 244 0.912281 2.22596564 Bacteria 2 Bacteria Bacteria 138 1.33e-36   NR MDH5511335.1 2026769 g15846 i0 77.8 15.3811475409836 81 18 99.6 0 1 243 83 163 MDH5511335.1 adenosylhomocysteinase [Nitrospinota bacterium] diamond 3753 138 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium
26776820 26776820 PRJNA577580_P_NODE_10101_length_288_cov_2.176744_g10023_i0 PRJNA577580 10101 288 2.176744 6.26902272 root 1 Root_unresolved Root_unresolved 84.3 4.06e-17   NR OGW00599.1 1801683 g10023 i0 47.4 3.01041666666667 95 43 96.9 3 9 287 20 109 OGW00599.1 MAG: hypothetical protein A2889_04190 [Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10] diamond 867 84.7 0.995277449822904 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;