RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA577580", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA577580 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27079661 27079661 PRJNA577580_P_NODE_5242_length_391_cov_1.286164_g5164_i0 PRJNA577580 5242 391 1.286164 5.02890124 Kipferlia bialata 797122 Fornicata other_Eukaryota 106 3.0899999999999993e-24   NR GIQ81406.1 797122 g5164 i0 51.9 1.45780051150895 108 52 82.9 0 387 64 132 239 GIQ81406.1 hypothetical protein KIPB_002359 [Kipferlia bialata] diamond 570 106 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
29353446 29353446 PRJNA577580_P_NODE_13349_length_254_cov_1.657459_g13271_i0 PRJNA577580 13349 254 1.657459 4.20994586 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 59.3 2.06e-8   NR KAG9397400.1 201153 g13271 i0 38 2.51574803149606 71 44 83.9 0 243 31 79 149 KAG9397400.1 EF-hand domain pair [Carpediemonas membranifera] diamond 639 59.3 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
30174400 30174400 PRJNA577580_P_NODE_6812_length_344_cov_2.361624_g6734_i0 PRJNA577580 6812 344 2.361624 8.12398656 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 55.8 2.89e-7   NR GKT36704.1 2918883 g6734 i0 35.4 0.715116279069767 82 43 68.9 2 104 340 7 81 GKT36704.1 hypothetical protein ADUPG1_009616 [Aduncisulcus paluster] diamond 246 55.8 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;